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Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods
BACKGROUND: The success of neuroimaging in revealing neural correlates of obsessive-compulsive disorder (OCD) has raised hopes of using magnetic resonance imaging (MRI) indices to discriminate patients with OCD and the healthy. The aim of this study was to explore MRI based OCD diagnosis using machi...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10617132/ https://www.ncbi.nlm.nih.gov/pubmed/37904114 http://dx.doi.org/10.1186/s12888-023-05299-2 |
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author | Huang, Fang-Fang Yang, Xiang-Yun Luo, Jia Yang, Xiao-Jie Meng, Fan-Qiang Wang, Peng-Chong Li, Zhan-Jiang |
author_facet | Huang, Fang-Fang Yang, Xiang-Yun Luo, Jia Yang, Xiao-Jie Meng, Fan-Qiang Wang, Peng-Chong Li, Zhan-Jiang |
author_sort | Huang, Fang-Fang |
collection | PubMed |
description | BACKGROUND: The success of neuroimaging in revealing neural correlates of obsessive-compulsive disorder (OCD) has raised hopes of using magnetic resonance imaging (MRI) indices to discriminate patients with OCD and the healthy. The aim of this study was to explore MRI based OCD diagnosis using machine learning methods. METHODS: Fifty patients with OCD and fifty healthy subjects were allocated into training and testing set by eight to two. Functional MRI (fMRI) indices, including amplitude of low-frequency fluctuation (ALFF), fractional ALFF (fALFF), regional homogeneity (ReHo), degree of centrality (DC), and structural MRI (sMRI) indices, including volume of gray matter, cortical thickness and sulcal depth, were extracted in each brain region as features. The features were reduced using least absolute shrinkage and selection operator regression on training set. Diagnosis models based on single MRI index / combined MRI indices were established on training set using support vector machine (SVM), logistic regression and random forest, and validated on testing set. RESULTS: SVM model based on combined fMRI indices, including ALFF, fALFF, ReHo and DC, achieved the optimal performance, with a cross-validation accuracy of 94%; on testing set, the area under the receiver operating characteristic curve was 0.90 and the validation accuracy was 85%. The selected features were located both within and outside the cortico-striato-thalamo-cortical (CSTC) circuit of OCD. Models based on single MRI index / combined fMRI and sMRI indices underperformed on the classification, with a largest validation accuracy of 75% from SVM model of ALFF on testing set. CONCLUSION: SVM model of combined fMRI indices has the greatest potential to discriminate patients with OCD and the healthy, suggesting a complementary effect of fMRI indices on the classification; the features were located within and outside the CSTC circuit, indicating an importance of including various brain regions in the model. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12888-023-05299-2. |
format | Online Article Text |
id | pubmed-10617132 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-106171322023-11-01 Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods Huang, Fang-Fang Yang, Xiang-Yun Luo, Jia Yang, Xiao-Jie Meng, Fan-Qiang Wang, Peng-Chong Li, Zhan-Jiang BMC Psychiatry Research BACKGROUND: The success of neuroimaging in revealing neural correlates of obsessive-compulsive disorder (OCD) has raised hopes of using magnetic resonance imaging (MRI) indices to discriminate patients with OCD and the healthy. The aim of this study was to explore MRI based OCD diagnosis using machine learning methods. METHODS: Fifty patients with OCD and fifty healthy subjects were allocated into training and testing set by eight to two. Functional MRI (fMRI) indices, including amplitude of low-frequency fluctuation (ALFF), fractional ALFF (fALFF), regional homogeneity (ReHo), degree of centrality (DC), and structural MRI (sMRI) indices, including volume of gray matter, cortical thickness and sulcal depth, were extracted in each brain region as features. The features were reduced using least absolute shrinkage and selection operator regression on training set. Diagnosis models based on single MRI index / combined MRI indices were established on training set using support vector machine (SVM), logistic regression and random forest, and validated on testing set. RESULTS: SVM model based on combined fMRI indices, including ALFF, fALFF, ReHo and DC, achieved the optimal performance, with a cross-validation accuracy of 94%; on testing set, the area under the receiver operating characteristic curve was 0.90 and the validation accuracy was 85%. The selected features were located both within and outside the cortico-striato-thalamo-cortical (CSTC) circuit of OCD. Models based on single MRI index / combined fMRI and sMRI indices underperformed on the classification, with a largest validation accuracy of 75% from SVM model of ALFF on testing set. CONCLUSION: SVM model of combined fMRI indices has the greatest potential to discriminate patients with OCD and the healthy, suggesting a complementary effect of fMRI indices on the classification; the features were located within and outside the CSTC circuit, indicating an importance of including various brain regions in the model. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12888-023-05299-2. BioMed Central 2023-10-30 /pmc/articles/PMC10617132/ /pubmed/37904114 http://dx.doi.org/10.1186/s12888-023-05299-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Huang, Fang-Fang Yang, Xiang-Yun Luo, Jia Yang, Xiao-Jie Meng, Fan-Qiang Wang, Peng-Chong Li, Zhan-Jiang Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods |
title | Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods |
title_full | Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods |
title_fullStr | Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods |
title_full_unstemmed | Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods |
title_short | Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods |
title_sort | functional and structural mri based obsessive-compulsive disorder diagnosis using machine learning methods |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10617132/ https://www.ncbi.nlm.nih.gov/pubmed/37904114 http://dx.doi.org/10.1186/s12888-023-05299-2 |
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