Cargando…
Global Phylogeography and Genomic Epidemiology of Carbapenem-Resistant bla(OXA-232)–Carrying Klebsiella pneumoniae Sequence Type 15 Lineage
Prevalence of carbapenem-resistant Klebsiella pneumoniae (CRKP) has compromised antimicrobial efficacy against severe infections worldwide. To monitor global spread, we conducted a comprehensive genomic epidemiologic study comparing sequences from 21 bla(OXA-232)–carrying CRKP isolates from China wi...
Autores principales: | , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Centers for Disease Control and Prevention
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10617323/ https://www.ncbi.nlm.nih.gov/pubmed/37877525 http://dx.doi.org/10.3201/eid2911.230463 |
_version_ | 1785129585443078144 |
---|---|
author | Wu, Yuye Jiang, Tian He, Xianhong Shao, Jiayu Wu, Chenghao Mao, Weifang Jia, Huiqiong He, Fang Kong, Yingying Wu, Jianyong Sun, Qingyang Sun, Long Draz, Mohamed S. Xie, Xinyou Zhang, Jun Ruan, Zhi |
author_facet | Wu, Yuye Jiang, Tian He, Xianhong Shao, Jiayu Wu, Chenghao Mao, Weifang Jia, Huiqiong He, Fang Kong, Yingying Wu, Jianyong Sun, Qingyang Sun, Long Draz, Mohamed S. Xie, Xinyou Zhang, Jun Ruan, Zhi |
author_sort | Wu, Yuye |
collection | PubMed |
description | Prevalence of carbapenem-resistant Klebsiella pneumoniae (CRKP) has compromised antimicrobial efficacy against severe infections worldwide. To monitor global spread, we conducted a comprehensive genomic epidemiologic study comparing sequences from 21 bla(OXA-232)–carrying CRKP isolates from China with K. pneumoniae sequence type (ST) 15 strains from 68 countries available in GenBank. Phylogenetic and phylogeographic analyses revealed all bla(OXA-232)–carrying CRKP isolates belonged to ST15 lineage and exhibited multidrug resistance. Analysis grouped 330 global bla(OXA-232)–carrying ST15 CRKP strains into 5 clades, indicating clonal transmission with small genetic distances among multiple strains. The lineage originated in the United States, then spread to Europe, Asia, Oceania, and Africa. Most recent common ancestor was traced back to 2000; mutations averaged ≈1.7 per year per genome. Our research helps identify key forces driving global spread of bla(OXA-232)–carrying CRKP ST15 lineage and emphasizes the importance of ongoing surveillance of epidemic CRKP. |
format | Online Article Text |
id | pubmed-10617323 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Centers for Disease Control and Prevention |
record_format | MEDLINE/PubMed |
spelling | pubmed-106173232023-11-01 Global Phylogeography and Genomic Epidemiology of Carbapenem-Resistant bla(OXA-232)–Carrying Klebsiella pneumoniae Sequence Type 15 Lineage Wu, Yuye Jiang, Tian He, Xianhong Shao, Jiayu Wu, Chenghao Mao, Weifang Jia, Huiqiong He, Fang Kong, Yingying Wu, Jianyong Sun, Qingyang Sun, Long Draz, Mohamed S. Xie, Xinyou Zhang, Jun Ruan, Zhi Emerg Infect Dis Research Prevalence of carbapenem-resistant Klebsiella pneumoniae (CRKP) has compromised antimicrobial efficacy against severe infections worldwide. To monitor global spread, we conducted a comprehensive genomic epidemiologic study comparing sequences from 21 bla(OXA-232)–carrying CRKP isolates from China with K. pneumoniae sequence type (ST) 15 strains from 68 countries available in GenBank. Phylogenetic and phylogeographic analyses revealed all bla(OXA-232)–carrying CRKP isolates belonged to ST15 lineage and exhibited multidrug resistance. Analysis grouped 330 global bla(OXA-232)–carrying ST15 CRKP strains into 5 clades, indicating clonal transmission with small genetic distances among multiple strains. The lineage originated in the United States, then spread to Europe, Asia, Oceania, and Africa. Most recent common ancestor was traced back to 2000; mutations averaged ≈1.7 per year per genome. Our research helps identify key forces driving global spread of bla(OXA-232)–carrying CRKP ST15 lineage and emphasizes the importance of ongoing surveillance of epidemic CRKP. Centers for Disease Control and Prevention 2023-11 /pmc/articles/PMC10617323/ /pubmed/37877525 http://dx.doi.org/10.3201/eid2911.230463 Text en https://creativecommons.org/licenses/by/4.0/Emerging Infectious Diseases is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited. |
spellingShingle | Research Wu, Yuye Jiang, Tian He, Xianhong Shao, Jiayu Wu, Chenghao Mao, Weifang Jia, Huiqiong He, Fang Kong, Yingying Wu, Jianyong Sun, Qingyang Sun, Long Draz, Mohamed S. Xie, Xinyou Zhang, Jun Ruan, Zhi Global Phylogeography and Genomic Epidemiology of Carbapenem-Resistant bla(OXA-232)–Carrying Klebsiella pneumoniae Sequence Type 15 Lineage |
title | Global Phylogeography and Genomic Epidemiology of Carbapenem-Resistant bla(OXA-232)–Carrying Klebsiella pneumoniae Sequence Type 15 Lineage |
title_full | Global Phylogeography and Genomic Epidemiology of Carbapenem-Resistant bla(OXA-232)–Carrying Klebsiella pneumoniae Sequence Type 15 Lineage |
title_fullStr | Global Phylogeography and Genomic Epidemiology of Carbapenem-Resistant bla(OXA-232)–Carrying Klebsiella pneumoniae Sequence Type 15 Lineage |
title_full_unstemmed | Global Phylogeography and Genomic Epidemiology of Carbapenem-Resistant bla(OXA-232)–Carrying Klebsiella pneumoniae Sequence Type 15 Lineage |
title_short | Global Phylogeography and Genomic Epidemiology of Carbapenem-Resistant bla(OXA-232)–Carrying Klebsiella pneumoniae Sequence Type 15 Lineage |
title_sort | global phylogeography and genomic epidemiology of carbapenem-resistant bla(oxa-232)–carrying klebsiella pneumoniae sequence type 15 lineage |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10617323/ https://www.ncbi.nlm.nih.gov/pubmed/37877525 http://dx.doi.org/10.3201/eid2911.230463 |
work_keys_str_mv | AT wuyuye globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT jiangtian globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT hexianhong globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT shaojiayu globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT wuchenghao globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT maoweifang globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT jiahuiqiong globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT hefang globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT kongyingying globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT wujianyong globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT sunqingyang globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT sunlong globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT drazmohameds globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT xiexinyou globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT zhangjun globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage AT ruanzhi globalphylogeographyandgenomicepidemiologyofcarbapenemresistantblaoxa232carryingklebsiellapneumoniaesequencetype15lineage |