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Spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough?

Spatial transcriptomics, the technology of visualizing cellular gene expression landscape in a cells native tissue location, has emerged as a powerful tool that allows us to address scientific questions that were elusive just a few years ago. This technological advance is a decisive jump in the tech...

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Autores principales: Shireman, Jack M., Cheng, Lingxin, Goel, Amiti, Garcia, Diogo Moniz, Partha, Sanil, Quiñones-Hinojosa, Alfredo, Kendziorski, Christina, Dey, Mahua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10618006/
https://www.ncbi.nlm.nih.gov/pubmed/37916170
http://dx.doi.org/10.3389/fonc.2023.1266397
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author Shireman, Jack M.
Cheng, Lingxin
Goel, Amiti
Garcia, Diogo Moniz
Partha, Sanil
Quiñones-Hinojosa, Alfredo
Kendziorski, Christina
Dey, Mahua
author_facet Shireman, Jack M.
Cheng, Lingxin
Goel, Amiti
Garcia, Diogo Moniz
Partha, Sanil
Quiñones-Hinojosa, Alfredo
Kendziorski, Christina
Dey, Mahua
author_sort Shireman, Jack M.
collection PubMed
description Spatial transcriptomics, the technology of visualizing cellular gene expression landscape in a cells native tissue location, has emerged as a powerful tool that allows us to address scientific questions that were elusive just a few years ago. This technological advance is a decisive jump in the technological evolution that is revolutionizing studies of tissue structure and function in health and disease through the introduction of an entirely new dimension of data, spatial context. Perhaps the organ within the body that relies most on spatial organization is the brain. The central nervous system’s complex microenvironmental and spatial architecture is tightly regulated during development, is maintained in health, and is detrimental when disturbed by pathologies. This inherent spatial complexity of the central nervous system makes it an exciting organ to study using spatial transcriptomics for pathologies primarily affecting the brain, of which Glioblastoma is one of the worst. Glioblastoma is a hyper-aggressive, incurable, neoplasm and has been hypothesized to not only integrate into the spatial architecture of the surrounding brain, but also possess an architecture of its own that might be actively remodeling the surrounding brain. In this review we will examine the current landscape of spatial transcriptomics in glioblastoma, outline novel findings emerging from the rising use of spatial transcriptomics, and discuss future directions and ultimate clinical/translational avenues.
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spelling pubmed-106180062023-11-01 Spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough? Shireman, Jack M. Cheng, Lingxin Goel, Amiti Garcia, Diogo Moniz Partha, Sanil Quiñones-Hinojosa, Alfredo Kendziorski, Christina Dey, Mahua Front Oncol Oncology Spatial transcriptomics, the technology of visualizing cellular gene expression landscape in a cells native tissue location, has emerged as a powerful tool that allows us to address scientific questions that were elusive just a few years ago. This technological advance is a decisive jump in the technological evolution that is revolutionizing studies of tissue structure and function in health and disease through the introduction of an entirely new dimension of data, spatial context. Perhaps the organ within the body that relies most on spatial organization is the brain. The central nervous system’s complex microenvironmental and spatial architecture is tightly regulated during development, is maintained in health, and is detrimental when disturbed by pathologies. This inherent spatial complexity of the central nervous system makes it an exciting organ to study using spatial transcriptomics for pathologies primarily affecting the brain, of which Glioblastoma is one of the worst. Glioblastoma is a hyper-aggressive, incurable, neoplasm and has been hypothesized to not only integrate into the spatial architecture of the surrounding brain, but also possess an architecture of its own that might be actively remodeling the surrounding brain. In this review we will examine the current landscape of spatial transcriptomics in glioblastoma, outline novel findings emerging from the rising use of spatial transcriptomics, and discuss future directions and ultimate clinical/translational avenues. Frontiers Media S.A. 2023-10-17 /pmc/articles/PMC10618006/ /pubmed/37916170 http://dx.doi.org/10.3389/fonc.2023.1266397 Text en Copyright © 2023 Shireman, Cheng, Goel, Garcia, Partha, Quiñones-Hinojosa, Kendziorski and Dey https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Shireman, Jack M.
Cheng, Lingxin
Goel, Amiti
Garcia, Diogo Moniz
Partha, Sanil
Quiñones-Hinojosa, Alfredo
Kendziorski, Christina
Dey, Mahua
Spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough?
title Spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough?
title_full Spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough?
title_fullStr Spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough?
title_full_unstemmed Spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough?
title_short Spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough?
title_sort spatial transcriptomics in glioblastoma: is knowing the right zip code the key to the next therapeutic breakthrough?
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10618006/
https://www.ncbi.nlm.nih.gov/pubmed/37916170
http://dx.doi.org/10.3389/fonc.2023.1266397
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