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Effects of stochastic coding on olfactory discrimination in flies and mice

Sparse coding can improve discrimination of sensory stimuli by reducing overlap between their representations. Two factors, however, can offset sparse coding’s benefits: similar sensory stimuli have significant overlap and responses vary across trials. To elucidate the effects of these 2 factors, we...

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Autores principales: Srinivasan, Shyam, Daste, Simon, Modi, Mehrab N., Turner, Glenn C., Fleischmann, Alexander, Navlakha, Saket
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10618007/
https://www.ncbi.nlm.nih.gov/pubmed/37906721
http://dx.doi.org/10.1371/journal.pbio.3002206
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author Srinivasan, Shyam
Daste, Simon
Modi, Mehrab N.
Turner, Glenn C.
Fleischmann, Alexander
Navlakha, Saket
author_facet Srinivasan, Shyam
Daste, Simon
Modi, Mehrab N.
Turner, Glenn C.
Fleischmann, Alexander
Navlakha, Saket
author_sort Srinivasan, Shyam
collection PubMed
description Sparse coding can improve discrimination of sensory stimuli by reducing overlap between their representations. Two factors, however, can offset sparse coding’s benefits: similar sensory stimuli have significant overlap and responses vary across trials. To elucidate the effects of these 2 factors, we analyzed odor responses in the fly and mouse olfactory regions implicated in learning and discrimination—the mushroom body (MB) and the piriform cortex (PCx). We found that neuronal responses fall along a continuum from extremely reliable across trials to extremely variable or stochastic. Computationally, we show that the observed variability arises from noise within central circuits rather than sensory noise. We propose this coding scheme to be advantageous for coarse- and fine-odor discrimination. More reliable cells enable quick discrimination between dissimilar odors. For similar odors, however, these cells overlap and do not provide distinguishing information. By contrast, more unreliable cells are decorrelated for similar odors, providing distinguishing information, though these benefits only accrue with extended training with more trials. Overall, we have uncovered a conserved, stochastic coding scheme in vertebrates and invertebrates, and we identify a candidate mechanism, based on variability in a winner-take-all (WTA) inhibitory circuit, that improves discrimination with training.
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spelling pubmed-106180072023-11-01 Effects of stochastic coding on olfactory discrimination in flies and mice Srinivasan, Shyam Daste, Simon Modi, Mehrab N. Turner, Glenn C. Fleischmann, Alexander Navlakha, Saket PLoS Biol Research Article Sparse coding can improve discrimination of sensory stimuli by reducing overlap between their representations. Two factors, however, can offset sparse coding’s benefits: similar sensory stimuli have significant overlap and responses vary across trials. To elucidate the effects of these 2 factors, we analyzed odor responses in the fly and mouse olfactory regions implicated in learning and discrimination—the mushroom body (MB) and the piriform cortex (PCx). We found that neuronal responses fall along a continuum from extremely reliable across trials to extremely variable or stochastic. Computationally, we show that the observed variability arises from noise within central circuits rather than sensory noise. We propose this coding scheme to be advantageous for coarse- and fine-odor discrimination. More reliable cells enable quick discrimination between dissimilar odors. For similar odors, however, these cells overlap and do not provide distinguishing information. By contrast, more unreliable cells are decorrelated for similar odors, providing distinguishing information, though these benefits only accrue with extended training with more trials. Overall, we have uncovered a conserved, stochastic coding scheme in vertebrates and invertebrates, and we identify a candidate mechanism, based on variability in a winner-take-all (WTA) inhibitory circuit, that improves discrimination with training. Public Library of Science 2023-10-31 /pmc/articles/PMC10618007/ /pubmed/37906721 http://dx.doi.org/10.1371/journal.pbio.3002206 Text en © 2023 Srinivasan et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Srinivasan, Shyam
Daste, Simon
Modi, Mehrab N.
Turner, Glenn C.
Fleischmann, Alexander
Navlakha, Saket
Effects of stochastic coding on olfactory discrimination in flies and mice
title Effects of stochastic coding on olfactory discrimination in flies and mice
title_full Effects of stochastic coding on olfactory discrimination in flies and mice
title_fullStr Effects of stochastic coding on olfactory discrimination in flies and mice
title_full_unstemmed Effects of stochastic coding on olfactory discrimination in flies and mice
title_short Effects of stochastic coding on olfactory discrimination in flies and mice
title_sort effects of stochastic coding on olfactory discrimination in flies and mice
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10618007/
https://www.ncbi.nlm.nih.gov/pubmed/37906721
http://dx.doi.org/10.1371/journal.pbio.3002206
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