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Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes’ theorem

In Japan an original pathological classification of IgA nephropathy was used, while Oxford classification of IgA nephropathy was used globally. The Oxford classification requires ≥ 8 glomeruli while the Japanese classification requires ≥ 10. Ninety-nine patients diagnosed with IgA nephropathy were i...

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Autores principales: Nakata, Takeshi, Tanigawa, Masato, Fukuda, Akihiro, Shibata, Hirotaka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10618293/
https://www.ncbi.nlm.nih.gov/pubmed/37907505
http://dx.doi.org/10.1038/s41598-023-45734-8
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author Nakata, Takeshi
Tanigawa, Masato
Fukuda, Akihiro
Shibata, Hirotaka
author_facet Nakata, Takeshi
Tanigawa, Masato
Fukuda, Akihiro
Shibata, Hirotaka
author_sort Nakata, Takeshi
collection PubMed
description In Japan an original pathological classification of IgA nephropathy was used, while Oxford classification of IgA nephropathy was used globally. The Oxford classification requires ≥ 8 glomeruli while the Japanese classification requires ≥ 10. Ninety-nine patients diagnosed with IgA nephropathy were included. To determine the accuracy of histological staging, we calculated the posterior probability using Bayes' theorem and adopted three model of prior distribution. First, the actual staging distribution was reclassified using the beta distribution (reclassified distribution). Second a model with the same distribution (actual distribution) as the actual staging was used. Third, a model assuming that all cases are equally distributed (equal distribution) was used. The median number of collected glomeruli was 12 (8–19). There were 33 cases (33%) wherein the glomerular count was ≤ 9. When only cases with ≥ 10 glomeruli were included, the median posterior probability was 91% (74–99) (actual distribution, 90% [74–98]; equal distribution, 85% [73–96]). Even among the 33 cases with ≤ 9 glomeruli, there were approximately 7 cases in which the posterior probability was ≥ 90% for each model. Using Bayesian probabilistic analysis, it was possible to evaluate the histologic classification of IgA nephropathy, even when the number of obtained glomeruli was ≤ 9.
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spelling pubmed-106182932023-11-02 Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes’ theorem Nakata, Takeshi Tanigawa, Masato Fukuda, Akihiro Shibata, Hirotaka Sci Rep Article In Japan an original pathological classification of IgA nephropathy was used, while Oxford classification of IgA nephropathy was used globally. The Oxford classification requires ≥ 8 glomeruli while the Japanese classification requires ≥ 10. Ninety-nine patients diagnosed with IgA nephropathy were included. To determine the accuracy of histological staging, we calculated the posterior probability using Bayes' theorem and adopted three model of prior distribution. First, the actual staging distribution was reclassified using the beta distribution (reclassified distribution). Second a model with the same distribution (actual distribution) as the actual staging was used. Third, a model assuming that all cases are equally distributed (equal distribution) was used. The median number of collected glomeruli was 12 (8–19). There were 33 cases (33%) wherein the glomerular count was ≤ 9. When only cases with ≥ 10 glomeruli were included, the median posterior probability was 91% (74–99) (actual distribution, 90% [74–98]; equal distribution, 85% [73–96]). Even among the 33 cases with ≤ 9 glomeruli, there were approximately 7 cases in which the posterior probability was ≥ 90% for each model. Using Bayesian probabilistic analysis, it was possible to evaluate the histologic classification of IgA nephropathy, even when the number of obtained glomeruli was ≤ 9. Nature Publishing Group UK 2023-10-31 /pmc/articles/PMC10618293/ /pubmed/37907505 http://dx.doi.org/10.1038/s41598-023-45734-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Nakata, Takeshi
Tanigawa, Masato
Fukuda, Akihiro
Shibata, Hirotaka
Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes’ theorem
title Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes’ theorem
title_full Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes’ theorem
title_fullStr Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes’ theorem
title_full_unstemmed Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes’ theorem
title_short Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes’ theorem
title_sort histological classification of japanese iga nephropathy with a small number of glomeruli using bayes’ theorem
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10618293/
https://www.ncbi.nlm.nih.gov/pubmed/37907505
http://dx.doi.org/10.1038/s41598-023-45734-8
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