Cargando…

Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting

OBJECTIVE: The aim of this study was to evaluate the potential real-world application of a machine learning (ML) algorithm, developed and trained on heart failure (HF) cohorts in the USA, to detect patients with undiagnosed wild type cardiac amyloidosis (ATTRwt) in the UK. DESIGN: In this retrospect...

Descripción completa

Detalles Bibliográficos
Autores principales: Tsang, Carmen, Huda, Ahsan, Norman, Max, Dickerson, Carissa, Leo, Vincenzo, Brownrigg, Jack, Mamas, Mamas, Elliott, Perry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10619059/
https://www.ncbi.nlm.nih.gov/pubmed/37899155
http://dx.doi.org/10.1136/bmjopen-2022-070028
_version_ 1785129906366054400
author Tsang, Carmen
Huda, Ahsan
Norman, Max
Dickerson, Carissa
Leo, Vincenzo
Brownrigg, Jack
Mamas, Mamas
Elliott, Perry
author_facet Tsang, Carmen
Huda, Ahsan
Norman, Max
Dickerson, Carissa
Leo, Vincenzo
Brownrigg, Jack
Mamas, Mamas
Elliott, Perry
author_sort Tsang, Carmen
collection PubMed
description OBJECTIVE: The aim of this study was to evaluate the potential real-world application of a machine learning (ML) algorithm, developed and trained on heart failure (HF) cohorts in the USA, to detect patients with undiagnosed wild type cardiac amyloidosis (ATTRwt) in the UK. DESIGN: In this retrospective observational study, anonymised, linked primary and secondary care data (Clinical Practice Research Datalink GOLD and Hospital Episode Statistics, respectively, were used to identify patients diagnosed with HF between 2009 and 2018 in the UK. International Classification of Diseases (ICD)-10 clinical modification codes were matched to equivalent Read (primary care) and ICD-10 WHO (secondary care) diagnosis codes used in the UK. In the absence of specific Read or ICD-10 WHO codes for ATTRwt, two proxy case definitions (definitive and possible cases) based on the degree of confidence that the contributing codes defined true ATTRwt cases were created using ML. PRIMARY OUTCOME MEASURE: Algorithm performance was evaluated primarily using the area under the receiver operating curve (AUROC) by comparing the actual versus algorithm predicted case definitions at varying sensitivities and specificities. RESULTS: The algorithm demonstrated strongest predictive ability when a combination of primary care and secondary care data were used (AUROC: 0.84 in definitive cohort and 0.86 in possible cohort). For primary care or secondary care data alone, performance ranged from 0.68 to 0.78. CONCLUSION: The ML algorithm, despite being developed in a US population, was effective at identifying patients that may have ATTRwt in a UK setting. Its potential use in research and clinical care to aid identification of patients with undiagnosed ATTRwt, possibly enabling earlier diagnosis in the disease pathway, should be investigated.
format Online
Article
Text
id pubmed-10619059
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher BMJ Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-106190592023-11-02 Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting Tsang, Carmen Huda, Ahsan Norman, Max Dickerson, Carissa Leo, Vincenzo Brownrigg, Jack Mamas, Mamas Elliott, Perry BMJ Open Cardiovascular Medicine OBJECTIVE: The aim of this study was to evaluate the potential real-world application of a machine learning (ML) algorithm, developed and trained on heart failure (HF) cohorts in the USA, to detect patients with undiagnosed wild type cardiac amyloidosis (ATTRwt) in the UK. DESIGN: In this retrospective observational study, anonymised, linked primary and secondary care data (Clinical Practice Research Datalink GOLD and Hospital Episode Statistics, respectively, were used to identify patients diagnosed with HF between 2009 and 2018 in the UK. International Classification of Diseases (ICD)-10 clinical modification codes were matched to equivalent Read (primary care) and ICD-10 WHO (secondary care) diagnosis codes used in the UK. In the absence of specific Read or ICD-10 WHO codes for ATTRwt, two proxy case definitions (definitive and possible cases) based on the degree of confidence that the contributing codes defined true ATTRwt cases were created using ML. PRIMARY OUTCOME MEASURE: Algorithm performance was evaluated primarily using the area under the receiver operating curve (AUROC) by comparing the actual versus algorithm predicted case definitions at varying sensitivities and specificities. RESULTS: The algorithm demonstrated strongest predictive ability when a combination of primary care and secondary care data were used (AUROC: 0.84 in definitive cohort and 0.86 in possible cohort). For primary care or secondary care data alone, performance ranged from 0.68 to 0.78. CONCLUSION: The ML algorithm, despite being developed in a US population, was effective at identifying patients that may have ATTRwt in a UK setting. Its potential use in research and clinical care to aid identification of patients with undiagnosed ATTRwt, possibly enabling earlier diagnosis in the disease pathway, should be investigated. BMJ Publishing Group 2023-10-29 /pmc/articles/PMC10619059/ /pubmed/37899155 http://dx.doi.org/10.1136/bmjopen-2022-070028 Text en © Author(s) (or their employer(s)) 2023. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) .
spellingShingle Cardiovascular Medicine
Tsang, Carmen
Huda, Ahsan
Norman, Max
Dickerson, Carissa
Leo, Vincenzo
Brownrigg, Jack
Mamas, Mamas
Elliott, Perry
Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting
title Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting
title_full Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting
title_fullStr Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting
title_full_unstemmed Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting
title_short Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting
title_sort detecting transthyretin amyloid cardiomyopathy (attr-cm) using machine learning: an evaluation of the performance of an algorithm in a uk setting
topic Cardiovascular Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10619059/
https://www.ncbi.nlm.nih.gov/pubmed/37899155
http://dx.doi.org/10.1136/bmjopen-2022-070028
work_keys_str_mv AT tsangcarmen detectingtransthyretinamyloidcardiomyopathyattrcmusingmachinelearninganevaluationoftheperformanceofanalgorithminauksetting
AT hudaahsan detectingtransthyretinamyloidcardiomyopathyattrcmusingmachinelearninganevaluationoftheperformanceofanalgorithminauksetting
AT normanmax detectingtransthyretinamyloidcardiomyopathyattrcmusingmachinelearninganevaluationoftheperformanceofanalgorithminauksetting
AT dickersoncarissa detectingtransthyretinamyloidcardiomyopathyattrcmusingmachinelearninganevaluationoftheperformanceofanalgorithminauksetting
AT leovincenzo detectingtransthyretinamyloidcardiomyopathyattrcmusingmachinelearninganevaluationoftheperformanceofanalgorithminauksetting
AT brownriggjack detectingtransthyretinamyloidcardiomyopathyattrcmusingmachinelearninganevaluationoftheperformanceofanalgorithminauksetting
AT mamasmamas detectingtransthyretinamyloidcardiomyopathyattrcmusingmachinelearninganevaluationoftheperformanceofanalgorithminauksetting
AT elliottperry detectingtransthyretinamyloidcardiomyopathyattrcmusingmachinelearninganevaluationoftheperformanceofanalgorithminauksetting