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Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography

Candida boidinii NAD(+)-dependent formate dehydrogenase (CbFDH) has gained significant attention for its potential application in the production of biofuels and various industrial chemicals from inorganic carbon dioxide. The present study reports the atomic X-ray crystal structures of wild-type CbFD...

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Autores principales: Gul, Mehmet, Yuksel, Busra, Bulut, Huri, DeMirci, Hasan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10619422/
https://www.ncbi.nlm.nih.gov/pubmed/37860962
http://dx.doi.org/10.1107/S2059798323008070
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author Gul, Mehmet
Yuksel, Busra
Bulut, Huri
DeMirci, Hasan
author_facet Gul, Mehmet
Yuksel, Busra
Bulut, Huri
DeMirci, Hasan
author_sort Gul, Mehmet
collection PubMed
description Candida boidinii NAD(+)-dependent formate dehydrogenase (CbFDH) has gained significant attention for its potential application in the production of biofuels and various industrial chemicals from inorganic carbon dioxide. The present study reports the atomic X-ray crystal structures of wild-type CbFDH at cryogenic and ambient temperatures, as well as that of the Val120Thr mutant at cryogenic temperature, determined at the Turkish Light Source ‘Turkish DeLight’. The structures reveal new hydrogen bonds between Thr120 and water molecules in the active site of the mutant CbFDH, suggesting increased stability of the active site and more efficient electron transfer during the reaction. Further experimental data is needed to test these hypotheses. Collectively, these findings provide invaluable insights into future protein-engineering efforts that could potentially enhance the efficiency and effectiveness of CbFDH.
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spelling pubmed-106194222023-11-02 Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography Gul, Mehmet Yuksel, Busra Bulut, Huri DeMirci, Hasan Acta Crystallogr D Struct Biol Research Papers Candida boidinii NAD(+)-dependent formate dehydrogenase (CbFDH) has gained significant attention for its potential application in the production of biofuels and various industrial chemicals from inorganic carbon dioxide. The present study reports the atomic X-ray crystal structures of wild-type CbFDH at cryogenic and ambient temperatures, as well as that of the Val120Thr mutant at cryogenic temperature, determined at the Turkish Light Source ‘Turkish DeLight’. The structures reveal new hydrogen bonds between Thr120 and water molecules in the active site of the mutant CbFDH, suggesting increased stability of the active site and more efficient electron transfer during the reaction. Further experimental data is needed to test these hypotheses. Collectively, these findings provide invaluable insights into future protein-engineering efforts that could potentially enhance the efficiency and effectiveness of CbFDH. International Union of Crystallography 2023-10-20 /pmc/articles/PMC10619422/ /pubmed/37860962 http://dx.doi.org/10.1107/S2059798323008070 Text en © Mehmet Gul et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Gul, Mehmet
Yuksel, Busra
Bulut, Huri
DeMirci, Hasan
Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography
title Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography
title_full Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography
title_fullStr Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography
title_full_unstemmed Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography
title_short Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography
title_sort structural analysis of wild-type and val120thr mutant candida boidinii formate dehydrogenase by x-ray crystallography
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10619422/
https://www.ncbi.nlm.nih.gov/pubmed/37860962
http://dx.doi.org/10.1107/S2059798323008070
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