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Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum
Corynebacterium glutamicum (C. glutamicum) has been considered a very important and meaningful industrial microorganism for the production of amino acids worldwide. To produce amino acids, cells require nicotinamide adenine dinucleotide phosphate (NADPH), which is a biological reducing agent. The pe...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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The Korean Society for Microbiology and Biotechnology
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10619557/ https://www.ncbi.nlm.nih.gov/pubmed/37417004 http://dx.doi.org/10.4014/jmb.2305.05002 |
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author | Yu, Hyeonjeong Hong, Jiyeon Seok, Jihye Seu, Young-Bae Kim, Il-Kwon Kim, Kyung-Jin |
author_facet | Yu, Hyeonjeong Hong, Jiyeon Seok, Jihye Seu, Young-Bae Kim, Il-Kwon Kim, Kyung-Jin |
author_sort | Yu, Hyeonjeong |
collection | PubMed |
description | Corynebacterium glutamicum (C. glutamicum) has been considered a very important and meaningful industrial microorganism for the production of amino acids worldwide. To produce amino acids, cells require nicotinamide adenine dinucleotide phosphate (NADPH), which is a biological reducing agent. The pentose phosphate pathway (PPP) can supply NADPH in cells via the 6-phosphogluconate dehydrogenase (6PGD) enzyme, which is an oxidoreductase that converts 6-phosphogluconate (6PG) to ribulose 5-phosphate (Ru5P), to produce NADPH. In this study, we identified the crystal structure of 6PGD_apo and 6PGD_NADP from C. glutamicum ATCC 13032 (Cg6PGD) and reported our biological research based on this structure. We identified the substrate binding site and co-factor binding site of Cg6PGD, which are crucial for understanding this enzyme. Based on the findings of our research, Cg6PGD is expected to be used as a NADPH resource in the food industry and as a drug target in the pharmaceutical industry. |
format | Online Article Text |
id | pubmed-10619557 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Korean Society for Microbiology and Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-106195572023-11-02 Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum Yu, Hyeonjeong Hong, Jiyeon Seok, Jihye Seu, Young-Bae Kim, Il-Kwon Kim, Kyung-Jin J Microbiol Biotechnol Research article Corynebacterium glutamicum (C. glutamicum) has been considered a very important and meaningful industrial microorganism for the production of amino acids worldwide. To produce amino acids, cells require nicotinamide adenine dinucleotide phosphate (NADPH), which is a biological reducing agent. The pentose phosphate pathway (PPP) can supply NADPH in cells via the 6-phosphogluconate dehydrogenase (6PGD) enzyme, which is an oxidoreductase that converts 6-phosphogluconate (6PG) to ribulose 5-phosphate (Ru5P), to produce NADPH. In this study, we identified the crystal structure of 6PGD_apo and 6PGD_NADP from C. glutamicum ATCC 13032 (Cg6PGD) and reported our biological research based on this structure. We identified the substrate binding site and co-factor binding site of Cg6PGD, which are crucial for understanding this enzyme. Based on the findings of our research, Cg6PGD is expected to be used as a NADPH resource in the food industry and as a drug target in the pharmaceutical industry. The Korean Society for Microbiology and Biotechnology 2023-10-28 2023-06-27 /pmc/articles/PMC10619557/ /pubmed/37417004 http://dx.doi.org/10.4014/jmb.2305.05002 Text en Copyright © 2023 by the authors. Licensee KMB https://creativecommons.org/licenses/by/4.0/This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/) |
spellingShingle | Research article Yu, Hyeonjeong Hong, Jiyeon Seok, Jihye Seu, Young-Bae Kim, Il-Kwon Kim, Kyung-Jin Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum |
title | Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum |
title_full | Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum |
title_fullStr | Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum |
title_full_unstemmed | Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum |
title_short | Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum |
title_sort | crystal structures of 6-phosphogluconate dehydrogenase from corynebacterium glutamicum |
topic | Research article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10619557/ https://www.ncbi.nlm.nih.gov/pubmed/37417004 http://dx.doi.org/10.4014/jmb.2305.05002 |
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