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Myristoyl’s dual role in allosterically regulating and localizing Abl kinase

c-Abl kinase, a key signaling hub in many biological processes ranging from cell development to proliferation, is tightly regulated by two inhibitory Src homology domains. An N-terminal myristoyl modification can bind to a hydrophobic pocket in the kinase C-lobe, which stabilizes the autoinhibitory...

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Detalles Bibliográficos
Autores principales: de Buhr, Svenja, Gräter, Frauke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10619977/
https://www.ncbi.nlm.nih.gov/pubmed/37843155
http://dx.doi.org/10.7554/eLife.85216
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author de Buhr, Svenja
Gräter, Frauke
author_facet de Buhr, Svenja
Gräter, Frauke
author_sort de Buhr, Svenja
collection PubMed
description c-Abl kinase, a key signaling hub in many biological processes ranging from cell development to proliferation, is tightly regulated by two inhibitory Src homology domains. An N-terminal myristoyl modification can bind to a hydrophobic pocket in the kinase C-lobe, which stabilizes the autoinhibitory assembly. Activation is triggered by myristoyl release. We used molecular dynamics simulations to show how both myristoyl and the Src homology domains are required to impose the full inhibitory effect on the kinase domain and reveal the allosteric transmission pathway at residue-level resolution. Importantly, we find myristoyl insertion into a membrane to thermodynamically compete with binding to c-Abl. Myristoyl thus not only localizes the protein to the cellular membrane, but membrane attachment at the same time enhances activation of c-Abl by stabilizing its preactivated state. Our data put forward a model in which lipidation tightly couples kinase localization and regulation, a scheme that currently appears to be unique for this non-receptor tyrosine kinase.
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spelling pubmed-106199772023-11-02 Myristoyl’s dual role in allosterically regulating and localizing Abl kinase de Buhr, Svenja Gräter, Frauke eLife Computational and Systems Biology c-Abl kinase, a key signaling hub in many biological processes ranging from cell development to proliferation, is tightly regulated by two inhibitory Src homology domains. An N-terminal myristoyl modification can bind to a hydrophobic pocket in the kinase C-lobe, which stabilizes the autoinhibitory assembly. Activation is triggered by myristoyl release. We used molecular dynamics simulations to show how both myristoyl and the Src homology domains are required to impose the full inhibitory effect on the kinase domain and reveal the allosteric transmission pathway at residue-level resolution. Importantly, we find myristoyl insertion into a membrane to thermodynamically compete with binding to c-Abl. Myristoyl thus not only localizes the protein to the cellular membrane, but membrane attachment at the same time enhances activation of c-Abl by stabilizing its preactivated state. Our data put forward a model in which lipidation tightly couples kinase localization and regulation, a scheme that currently appears to be unique for this non-receptor tyrosine kinase. eLife Sciences Publications, Ltd 2023-10-16 /pmc/articles/PMC10619977/ /pubmed/37843155 http://dx.doi.org/10.7554/eLife.85216 Text en © 2023, de Buhr and Gräter https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Computational and Systems Biology
de Buhr, Svenja
Gräter, Frauke
Myristoyl’s dual role in allosterically regulating and localizing Abl kinase
title Myristoyl’s dual role in allosterically regulating and localizing Abl kinase
title_full Myristoyl’s dual role in allosterically regulating and localizing Abl kinase
title_fullStr Myristoyl’s dual role in allosterically regulating and localizing Abl kinase
title_full_unstemmed Myristoyl’s dual role in allosterically regulating and localizing Abl kinase
title_short Myristoyl’s dual role in allosterically regulating and localizing Abl kinase
title_sort myristoyl’s dual role in allosterically regulating and localizing abl kinase
topic Computational and Systems Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10619977/
https://www.ncbi.nlm.nih.gov/pubmed/37843155
http://dx.doi.org/10.7554/eLife.85216
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