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CT image segmentation of meat sheep Loin based on deep learning

There are no clear boundaries between internal tissues in sheep Computerized Tomography images, and it is difficult for traditional methods to meet the requirements of image segmentation in application. Deep learning has shown excellent performance in image analysis. In this context, we investigated...

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Detalles Bibliográficos
Autores principales: Cao, Xiaoyao, Lu, Yihang, Yang, Luming, Zhu, Guangjie, Hu, Xinyue, Lu, Xiaofang, Yin, Jing, Guo, Peng, Zhang, Qingfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10621832/
https://www.ncbi.nlm.nih.gov/pubmed/37917607
http://dx.doi.org/10.1371/journal.pone.0293764
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author Cao, Xiaoyao
Lu, Yihang
Yang, Luming
Zhu, Guangjie
Hu, Xinyue
Lu, Xiaofang
Yin, Jing
Guo, Peng
Zhang, Qingfeng
author_facet Cao, Xiaoyao
Lu, Yihang
Yang, Luming
Zhu, Guangjie
Hu, Xinyue
Lu, Xiaofang
Yin, Jing
Guo, Peng
Zhang, Qingfeng
author_sort Cao, Xiaoyao
collection PubMed
description There are no clear boundaries between internal tissues in sheep Computerized Tomography images, and it is difficult for traditional methods to meet the requirements of image segmentation in application. Deep learning has shown excellent performance in image analysis. In this context, we investigated the Loin CT image segmentation of sheep based on deep learning models. The Fully Convolutional Neural Network (FCN) and 5 different UNet models were applied in image segmentation on the data set of 1471 CT images including the Loin part from 25 Australian White rams and Dolper rams using the method of 5-fold cross validation. After 10 independent runs, different evaluation metrics were applied to assess the performances of the models. All models showed excellent results in terms evaluation metrics. There were slight differences among the results from the six models, and Attention-UNet outperformed others methods with 0.998±0.009 in accuracy, 4.391±0.338 in AVER_HD, 0.90±0.012 in MIOU and 0.95±0.007 in DICE, respectively, while the optimal value of LOSS was 0.029±0.018 from Channel-UNet, and the running time of ResNet34-UNet is the shortest.
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spelling pubmed-106218322023-11-03 CT image segmentation of meat sheep Loin based on deep learning Cao, Xiaoyao Lu, Yihang Yang, Luming Zhu, Guangjie Hu, Xinyue Lu, Xiaofang Yin, Jing Guo, Peng Zhang, Qingfeng PLoS One Research Article There are no clear boundaries between internal tissues in sheep Computerized Tomography images, and it is difficult for traditional methods to meet the requirements of image segmentation in application. Deep learning has shown excellent performance in image analysis. In this context, we investigated the Loin CT image segmentation of sheep based on deep learning models. The Fully Convolutional Neural Network (FCN) and 5 different UNet models were applied in image segmentation on the data set of 1471 CT images including the Loin part from 25 Australian White rams and Dolper rams using the method of 5-fold cross validation. After 10 independent runs, different evaluation metrics were applied to assess the performances of the models. All models showed excellent results in terms evaluation metrics. There were slight differences among the results from the six models, and Attention-UNet outperformed others methods with 0.998±0.009 in accuracy, 4.391±0.338 in AVER_HD, 0.90±0.012 in MIOU and 0.95±0.007 in DICE, respectively, while the optimal value of LOSS was 0.029±0.018 from Channel-UNet, and the running time of ResNet34-UNet is the shortest. Public Library of Science 2023-11-02 /pmc/articles/PMC10621832/ /pubmed/37917607 http://dx.doi.org/10.1371/journal.pone.0293764 Text en © 2023 Cao et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Cao, Xiaoyao
Lu, Yihang
Yang, Luming
Zhu, Guangjie
Hu, Xinyue
Lu, Xiaofang
Yin, Jing
Guo, Peng
Zhang, Qingfeng
CT image segmentation of meat sheep Loin based on deep learning
title CT image segmentation of meat sheep Loin based on deep learning
title_full CT image segmentation of meat sheep Loin based on deep learning
title_fullStr CT image segmentation of meat sheep Loin based on deep learning
title_full_unstemmed CT image segmentation of meat sheep Loin based on deep learning
title_short CT image segmentation of meat sheep Loin based on deep learning
title_sort ct image segmentation of meat sheep loin based on deep learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10621832/
https://www.ncbi.nlm.nih.gov/pubmed/37917607
http://dx.doi.org/10.1371/journal.pone.0293764
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