Cargando…
Natural language processing to identify social determinants of health in Alzheimer's disease and related dementia from electronic health records
OBJECTIVE: To develop a natural language processing (NLP) algorithm that identifies social determinants of health (SDoH), including housing, transportation, food, and medication insecurities, social isolation, abuse, neglect, or exploitation, and financial difficulties for patients with Alzheimer...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Blackwell Publishing Ltd
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10622277/ https://www.ncbi.nlm.nih.gov/pubmed/37534741 http://dx.doi.org/10.1111/1475-6773.14210 |
_version_ | 1785130501753798656 |
---|---|
author | Wu, Wenbo Holkeboer, Kaes J. Kolawole, Temidun O. Carbone, Lorrie Mahmoudi, Elham |
author_facet | Wu, Wenbo Holkeboer, Kaes J. Kolawole, Temidun O. Carbone, Lorrie Mahmoudi, Elham |
author_sort | Wu, Wenbo |
collection | PubMed |
description | OBJECTIVE: To develop a natural language processing (NLP) algorithm that identifies social determinants of health (SDoH), including housing, transportation, food, and medication insecurities, social isolation, abuse, neglect, or exploitation, and financial difficulties for patients with Alzheimer's disease and related dementias (ADRD) from unstructured electronic health records (EHRs). DATA SOURCES AND STUDY SETTING: We leveraged 1000 medical notes randomly selected from 7401 emergency department and inpatient social worker notes generated between 2015 and 2019 for 231 unique patients diagnosed with ADRD at Michigan Medicine. STUDY DESIGN: We developed a rule‐based NLP algorithm for the identification of seven domains of SDoH noted above. We also compared the rule‐based algorithm with deep learning and regularized logistic regression approaches. These models were compared using accuracy, sensitivity, specificity, F1 score, and the area under the receiver operating characteristic curve (AUC). All notes were split into 700 notes for training NLP algorithms, and 300 notes for validation. DATA COLLECTION/EXTRACTION METHODS: Social worker notes used in this study were extracted from the Michigan Medicine EHR database. PRINCIPAL FINDINGS: Of the 700 notes for training, F1 and AUC for the rule‐based algorithm were at least 0.94 and 0.95, respectively, for all SDoH categories. Of the 300 notes for validation, F1 and AUC were at least 0.80 and 0.97, respectively, for all SDoH except housing and medication insecurities. The deep learning and regularized logistic regression algorithms had unsatisfactory performance. CONCLUSIONS: The rule‐based algorithm can accurately extract SDoH information in all seven domains of SDoH except housing and medication insecurities. Findings from the algorithm can be used by clinicians and social workers to proactively address social needs of patients with ADRD and other vulnerable patient populations. |
format | Online Article Text |
id | pubmed-10622277 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Blackwell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-106222772023-11-04 Natural language processing to identify social determinants of health in Alzheimer's disease and related dementia from electronic health records Wu, Wenbo Holkeboer, Kaes J. Kolawole, Temidun O. Carbone, Lorrie Mahmoudi, Elham Health Serv Res Methods Corner OBJECTIVE: To develop a natural language processing (NLP) algorithm that identifies social determinants of health (SDoH), including housing, transportation, food, and medication insecurities, social isolation, abuse, neglect, or exploitation, and financial difficulties for patients with Alzheimer's disease and related dementias (ADRD) from unstructured electronic health records (EHRs). DATA SOURCES AND STUDY SETTING: We leveraged 1000 medical notes randomly selected from 7401 emergency department and inpatient social worker notes generated between 2015 and 2019 for 231 unique patients diagnosed with ADRD at Michigan Medicine. STUDY DESIGN: We developed a rule‐based NLP algorithm for the identification of seven domains of SDoH noted above. We also compared the rule‐based algorithm with deep learning and regularized logistic regression approaches. These models were compared using accuracy, sensitivity, specificity, F1 score, and the area under the receiver operating characteristic curve (AUC). All notes were split into 700 notes for training NLP algorithms, and 300 notes for validation. DATA COLLECTION/EXTRACTION METHODS: Social worker notes used in this study were extracted from the Michigan Medicine EHR database. PRINCIPAL FINDINGS: Of the 700 notes for training, F1 and AUC for the rule‐based algorithm were at least 0.94 and 0.95, respectively, for all SDoH categories. Of the 300 notes for validation, F1 and AUC were at least 0.80 and 0.97, respectively, for all SDoH except housing and medication insecurities. The deep learning and regularized logistic regression algorithms had unsatisfactory performance. CONCLUSIONS: The rule‐based algorithm can accurately extract SDoH information in all seven domains of SDoH except housing and medication insecurities. Findings from the algorithm can be used by clinicians and social workers to proactively address social needs of patients with ADRD and other vulnerable patient populations. Blackwell Publishing Ltd 2023-08-03 2023-12 /pmc/articles/PMC10622277/ /pubmed/37534741 http://dx.doi.org/10.1111/1475-6773.14210 Text en © 2023 The Authors. Health Services Research published by Wiley Periodicals LLC on behalf of Health Research and Educational Trust. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Methods Corner Wu, Wenbo Holkeboer, Kaes J. Kolawole, Temidun O. Carbone, Lorrie Mahmoudi, Elham Natural language processing to identify social determinants of health in Alzheimer's disease and related dementia from electronic health records |
title | Natural language processing to identify social determinants of health in Alzheimer's disease and related dementia from electronic health records |
title_full | Natural language processing to identify social determinants of health in Alzheimer's disease and related dementia from electronic health records |
title_fullStr | Natural language processing to identify social determinants of health in Alzheimer's disease and related dementia from electronic health records |
title_full_unstemmed | Natural language processing to identify social determinants of health in Alzheimer's disease and related dementia from electronic health records |
title_short | Natural language processing to identify social determinants of health in Alzheimer's disease and related dementia from electronic health records |
title_sort | natural language processing to identify social determinants of health in alzheimer's disease and related dementia from electronic health records |
topic | Methods Corner |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10622277/ https://www.ncbi.nlm.nih.gov/pubmed/37534741 http://dx.doi.org/10.1111/1475-6773.14210 |
work_keys_str_mv | AT wuwenbo naturallanguageprocessingtoidentifysocialdeterminantsofhealthinalzheimersdiseaseandrelateddementiafromelectronichealthrecords AT holkeboerkaesj naturallanguageprocessingtoidentifysocialdeterminantsofhealthinalzheimersdiseaseandrelateddementiafromelectronichealthrecords AT kolawoletemiduno naturallanguageprocessingtoidentifysocialdeterminantsofhealthinalzheimersdiseaseandrelateddementiafromelectronichealthrecords AT carbonelorrie naturallanguageprocessingtoidentifysocialdeterminantsofhealthinalzheimersdiseaseandrelateddementiafromelectronichealthrecords AT mahmoudielham naturallanguageprocessingtoidentifysocialdeterminantsofhealthinalzheimersdiseaseandrelateddementiafromelectronichealthrecords |