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Comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease

Chronic kidney disease (CKD) is a common disease that seriously endangers human health. However, the potential relationship between xanthine oxidoreductase (XOR) activity and CKD remains unclear. In this study, we used clinical data, CKD datasets from the Gene Expression Omnibus database, and untarg...

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Autores principales: Zhang, Yiyuan, Ding, Xiaobao, Guo, Lihao, Zhong, Yanan, Xie, Juan, Xu, Yong, Li, Hailun, Zheng, Donghui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10622700/
https://www.ncbi.nlm.nih.gov/pubmed/37927553
http://dx.doi.org/10.1016/j.isci.2023.107332
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author Zhang, Yiyuan
Ding, Xiaobao
Guo, Lihao
Zhong, Yanan
Xie, Juan
Xu, Yong
Li, Hailun
Zheng, Donghui
author_facet Zhang, Yiyuan
Ding, Xiaobao
Guo, Lihao
Zhong, Yanan
Xie, Juan
Xu, Yong
Li, Hailun
Zheng, Donghui
author_sort Zhang, Yiyuan
collection PubMed
description Chronic kidney disease (CKD) is a common disease that seriously endangers human health. However, the potential relationship between xanthine oxidoreductase (XOR) activity and CKD remains unclear. In this study, we used clinical data, CKD datasets from the Gene Expression Omnibus database, and untargeted metabolomics to explain the relationship between XOR activity and CKD. First, XOR activity showed high correlation with the biomarkers of CKD, such as serum creatinine, blood urea nitrogen, uric acid, and estimated glomerular filtration rate. Then, we used least absolute shrinkage and selection operator logical regression algorithm and random forest algorithm to screen CKD molecular markers from differentially expressed genes, and the results of qRT-PCR of XDH, KOX-1, and ROMO1 were in accordance with the results of bioinformatics analyses. In addition, untargeted metabolomics analysis revealed that the purine metabolism pathway was significantly enriched in CKD patients in the simulated models of kidney fibrosis.
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spelling pubmed-106227002023-11-04 Comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease Zhang, Yiyuan Ding, Xiaobao Guo, Lihao Zhong, Yanan Xie, Juan Xu, Yong Li, Hailun Zheng, Donghui iScience Article Chronic kidney disease (CKD) is a common disease that seriously endangers human health. However, the potential relationship between xanthine oxidoreductase (XOR) activity and CKD remains unclear. In this study, we used clinical data, CKD datasets from the Gene Expression Omnibus database, and untargeted metabolomics to explain the relationship between XOR activity and CKD. First, XOR activity showed high correlation with the biomarkers of CKD, such as serum creatinine, blood urea nitrogen, uric acid, and estimated glomerular filtration rate. Then, we used least absolute shrinkage and selection operator logical regression algorithm and random forest algorithm to screen CKD molecular markers from differentially expressed genes, and the results of qRT-PCR of XDH, KOX-1, and ROMO1 were in accordance with the results of bioinformatics analyses. In addition, untargeted metabolomics analysis revealed that the purine metabolism pathway was significantly enriched in CKD patients in the simulated models of kidney fibrosis. Elsevier 2023-07-10 /pmc/articles/PMC10622700/ /pubmed/37927553 http://dx.doi.org/10.1016/j.isci.2023.107332 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Zhang, Yiyuan
Ding, Xiaobao
Guo, Lihao
Zhong, Yanan
Xie, Juan
Xu, Yong
Li, Hailun
Zheng, Donghui
Comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease
title Comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease
title_full Comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease
title_fullStr Comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease
title_full_unstemmed Comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease
title_short Comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease
title_sort comprehensive analysis of the relationship between xanthine oxidoreductase activity and chronic kidney disease
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10622700/
https://www.ncbi.nlm.nih.gov/pubmed/37927553
http://dx.doi.org/10.1016/j.isci.2023.107332
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