Cargando…
Direct prediction of gas adsorption via spatial atom interaction learning
Physisorption relying on crystalline porous materials offers prospective avenues for sustainable separation processes, greenhouse gas capture, and energy storage. However, the lack of end-to-end deep learning model for adsorption prediction confines the rapid and precise screen of crystalline porous...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10624870/ https://www.ncbi.nlm.nih.gov/pubmed/37923711 http://dx.doi.org/10.1038/s41467-023-42863-6 |
_version_ | 1785131003285602304 |
---|---|
author | Cui, Jiyu Wu, Fang Zhang, Wen Yang, Lifeng Hu, Jianbo Fang, Yin Ye, Peng Zhang, Qiang Suo, Xian Mo, Yiming Cui, Xili Chen, Huajun Xing, Huabin |
author_facet | Cui, Jiyu Wu, Fang Zhang, Wen Yang, Lifeng Hu, Jianbo Fang, Yin Ye, Peng Zhang, Qiang Suo, Xian Mo, Yiming Cui, Xili Chen, Huajun Xing, Huabin |
author_sort | Cui, Jiyu |
collection | PubMed |
description | Physisorption relying on crystalline porous materials offers prospective avenues for sustainable separation processes, greenhouse gas capture, and energy storage. However, the lack of end-to-end deep learning model for adsorption prediction confines the rapid and precise screen of crystalline porous materials. Here, we present DeepSorption, a spatial atom interaction learning network that realizes accurate, fast, and direct structure-adsorption prediction with only information of atomic coordinate and chemical element types. The breakthrough in prediction is attributed to the awareness of global structure and local spatial atom interactions endowed by the developed Matformer, which provides the intuitive visualization of atomic-level thinking and executing trajectory in crystalline porous materials prediction. Complete adsorption curves prediction could be performed using DeepSorption with a higher accuracy than Grand canonical Monte Carlo simulation and other machine learning models, a 20-35% decline in the mean absolute error compared to graph neural network CGCNN and machine learning models based on descriptors. Since the established direct associations between raw structure and target functions are based on the understanding of the fundamental chemistry of interatomic interactions, the deep learning network is rationally universal in predicting the different physicochemical properties of various crystalline materials. |
format | Online Article Text |
id | pubmed-10624870 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106248702023-11-05 Direct prediction of gas adsorption via spatial atom interaction learning Cui, Jiyu Wu, Fang Zhang, Wen Yang, Lifeng Hu, Jianbo Fang, Yin Ye, Peng Zhang, Qiang Suo, Xian Mo, Yiming Cui, Xili Chen, Huajun Xing, Huabin Nat Commun Article Physisorption relying on crystalline porous materials offers prospective avenues for sustainable separation processes, greenhouse gas capture, and energy storage. However, the lack of end-to-end deep learning model for adsorption prediction confines the rapid and precise screen of crystalline porous materials. Here, we present DeepSorption, a spatial atom interaction learning network that realizes accurate, fast, and direct structure-adsorption prediction with only information of atomic coordinate and chemical element types. The breakthrough in prediction is attributed to the awareness of global structure and local spatial atom interactions endowed by the developed Matformer, which provides the intuitive visualization of atomic-level thinking and executing trajectory in crystalline porous materials prediction. Complete adsorption curves prediction could be performed using DeepSorption with a higher accuracy than Grand canonical Monte Carlo simulation and other machine learning models, a 20-35% decline in the mean absolute error compared to graph neural network CGCNN and machine learning models based on descriptors. Since the established direct associations between raw structure and target functions are based on the understanding of the fundamental chemistry of interatomic interactions, the deep learning network is rationally universal in predicting the different physicochemical properties of various crystalline materials. Nature Publishing Group UK 2023-11-03 /pmc/articles/PMC10624870/ /pubmed/37923711 http://dx.doi.org/10.1038/s41467-023-42863-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Cui, Jiyu Wu, Fang Zhang, Wen Yang, Lifeng Hu, Jianbo Fang, Yin Ye, Peng Zhang, Qiang Suo, Xian Mo, Yiming Cui, Xili Chen, Huajun Xing, Huabin Direct prediction of gas adsorption via spatial atom interaction learning |
title | Direct prediction of gas adsorption via spatial atom interaction learning |
title_full | Direct prediction of gas adsorption via spatial atom interaction learning |
title_fullStr | Direct prediction of gas adsorption via spatial atom interaction learning |
title_full_unstemmed | Direct prediction of gas adsorption via spatial atom interaction learning |
title_short | Direct prediction of gas adsorption via spatial atom interaction learning |
title_sort | direct prediction of gas adsorption via spatial atom interaction learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10624870/ https://www.ncbi.nlm.nih.gov/pubmed/37923711 http://dx.doi.org/10.1038/s41467-023-42863-6 |
work_keys_str_mv | AT cuijiyu directpredictionofgasadsorptionviaspatialatominteractionlearning AT wufang directpredictionofgasadsorptionviaspatialatominteractionlearning AT zhangwen directpredictionofgasadsorptionviaspatialatominteractionlearning AT yanglifeng directpredictionofgasadsorptionviaspatialatominteractionlearning AT hujianbo directpredictionofgasadsorptionviaspatialatominteractionlearning AT fangyin directpredictionofgasadsorptionviaspatialatominteractionlearning AT yepeng directpredictionofgasadsorptionviaspatialatominteractionlearning AT zhangqiang directpredictionofgasadsorptionviaspatialatominteractionlearning AT suoxian directpredictionofgasadsorptionviaspatialatominteractionlearning AT moyiming directpredictionofgasadsorptionviaspatialatominteractionlearning AT cuixili directpredictionofgasadsorptionviaspatialatominteractionlearning AT chenhuajun directpredictionofgasadsorptionviaspatialatominteractionlearning AT xinghuabin directpredictionofgasadsorptionviaspatialatominteractionlearning |