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An Intelligent Synthetic Bacterium for Chronological Toxicant Detection, Biodegradation, and Its Subsequent Suicide

Modules, toolboxes, and synthetic biology systems may be designed to address environmental bioremediation. However, weak and decentralized functional modules require complex control. To address this issue, an integrated system for toxicant detection and biodegradation, and subsequent suicide in chro...

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Autores principales: Liu, Huan, Zhang, Lige, Wang, Weiwei, Hu, Haiyang, Ouyang, Xingyu, Xu, Ping, Tang, Hongzhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10625131/
https://www.ncbi.nlm.nih.gov/pubmed/37705081
http://dx.doi.org/10.1002/advs.202304318
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author Liu, Huan
Zhang, Lige
Wang, Weiwei
Hu, Haiyang
Ouyang, Xingyu
Xu, Ping
Tang, Hongzhi
author_facet Liu, Huan
Zhang, Lige
Wang, Weiwei
Hu, Haiyang
Ouyang, Xingyu
Xu, Ping
Tang, Hongzhi
author_sort Liu, Huan
collection PubMed
description Modules, toolboxes, and synthetic biology systems may be designed to address environmental bioremediation. However, weak and decentralized functional modules require complex control. To address this issue, an integrated system for toxicant detection and biodegradation, and subsequent suicide in chronological order without exogenous inducers is constructed. Salicylic acid, a typical pollutant in industrial wastewater, is selected as an example to demonstrate this design. Biosensors are optimized by regulating the expression of receptors and reporters to get 2‐fold sensitivity and 6‐fold maximum output. Several stationary phase promoters are compared, and promoter P (fic) is chosen to express the degradation enzyme. Two concepts for suicide circuits are developed, with the toxin/antitoxin circuit showing potent lethality. The three modules are coupled in a stepwise manner. Detection and biodegradation, and suicide are sequentially completed with partial attenuation compared to pre‐integration, except for biodegradation, being improved by the replacements of ribosome binding site. Finally, a long‐term stability test reveals that the engineered strain maintained its function for ten generations. The study provides a novel concept for integrating and controlling functional modules that can accelerate the transition of synthetic biology from conceptual to practical applications.
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spelling pubmed-106251312023-11-05 An Intelligent Synthetic Bacterium for Chronological Toxicant Detection, Biodegradation, and Its Subsequent Suicide Liu, Huan Zhang, Lige Wang, Weiwei Hu, Haiyang Ouyang, Xingyu Xu, Ping Tang, Hongzhi Adv Sci (Weinh) Research Articles Modules, toolboxes, and synthetic biology systems may be designed to address environmental bioremediation. However, weak and decentralized functional modules require complex control. To address this issue, an integrated system for toxicant detection and biodegradation, and subsequent suicide in chronological order without exogenous inducers is constructed. Salicylic acid, a typical pollutant in industrial wastewater, is selected as an example to demonstrate this design. Biosensors are optimized by regulating the expression of receptors and reporters to get 2‐fold sensitivity and 6‐fold maximum output. Several stationary phase promoters are compared, and promoter P (fic) is chosen to express the degradation enzyme. Two concepts for suicide circuits are developed, with the toxin/antitoxin circuit showing potent lethality. The three modules are coupled in a stepwise manner. Detection and biodegradation, and suicide are sequentially completed with partial attenuation compared to pre‐integration, except for biodegradation, being improved by the replacements of ribosome binding site. Finally, a long‐term stability test reveals that the engineered strain maintained its function for ten generations. The study provides a novel concept for integrating and controlling functional modules that can accelerate the transition of synthetic biology from conceptual to practical applications. John Wiley and Sons Inc. 2023-09-13 /pmc/articles/PMC10625131/ /pubmed/37705081 http://dx.doi.org/10.1002/advs.202304318 Text en © 2023 The Authors. Advanced Science published by Wiley‐VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Liu, Huan
Zhang, Lige
Wang, Weiwei
Hu, Haiyang
Ouyang, Xingyu
Xu, Ping
Tang, Hongzhi
An Intelligent Synthetic Bacterium for Chronological Toxicant Detection, Biodegradation, and Its Subsequent Suicide
title An Intelligent Synthetic Bacterium for Chronological Toxicant Detection, Biodegradation, and Its Subsequent Suicide
title_full An Intelligent Synthetic Bacterium for Chronological Toxicant Detection, Biodegradation, and Its Subsequent Suicide
title_fullStr An Intelligent Synthetic Bacterium for Chronological Toxicant Detection, Biodegradation, and Its Subsequent Suicide
title_full_unstemmed An Intelligent Synthetic Bacterium for Chronological Toxicant Detection, Biodegradation, and Its Subsequent Suicide
title_short An Intelligent Synthetic Bacterium for Chronological Toxicant Detection, Biodegradation, and Its Subsequent Suicide
title_sort intelligent synthetic bacterium for chronological toxicant detection, biodegradation, and its subsequent suicide
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10625131/
https://www.ncbi.nlm.nih.gov/pubmed/37705081
http://dx.doi.org/10.1002/advs.202304318
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