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YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C

Genetically encoded calcium indicators based on truncated troponin C are attractive probes for calcium imaging due to their relatively small molecular size and twofold reduced calcium ion buffering. However, the best‐suited members of this family, YTnC and cNTnC, suffer from low molecular brightness...

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Autores principales: Subach, Oksana M., Vlaskina, Anna V., Agapova, Yulia K., Nikolaeva, Alena Y., Varizhuk, Anna M., Podgorny, Oleg V., Piatkevich, Kiryl D., Patrushev, Maxim V., Boyko, Konstantin M., Subach, Fedor V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10626279/
https://www.ncbi.nlm.nih.gov/pubmed/37650870
http://dx.doi.org/10.1002/2211-5463.13702
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author Subach, Oksana M.
Vlaskina, Anna V.
Agapova, Yulia K.
Nikolaeva, Alena Y.
Varizhuk, Anna M.
Podgorny, Oleg V.
Piatkevich, Kiryl D.
Patrushev, Maxim V.
Boyko, Konstantin M.
Subach, Fedor V.
author_facet Subach, Oksana M.
Vlaskina, Anna V.
Agapova, Yulia K.
Nikolaeva, Alena Y.
Varizhuk, Anna M.
Podgorny, Oleg V.
Piatkevich, Kiryl D.
Patrushev, Maxim V.
Boyko, Konstantin M.
Subach, Fedor V.
author_sort Subach, Oksana M.
collection PubMed
description Genetically encoded calcium indicators based on truncated troponin C are attractive probes for calcium imaging due to their relatively small molecular size and twofold reduced calcium ion buffering. However, the best‐suited members of this family, YTnC and cNTnC, suffer from low molecular brightness, limited dynamic range, and/or poor sensitivity to calcium transients in neurons. To overcome these limitations, we developed an enhanced version of YTnC, named YTnC2. Compared with YTnC, YTnC2 had 5.7‐fold higher molecular brightness and 6.4‐fold increased dynamic range in vitro. YTnC2 was successfully used to reveal calcium transients in the cytosol and in the lumen of mitochondria of both mammalian cells and cultured neurons. Finally, we obtained and analyzed the crystal structure of the fluorescent domain of the YTnC2 mutant.
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spelling pubmed-106262792023-11-07 YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C Subach, Oksana M. Vlaskina, Anna V. Agapova, Yulia K. Nikolaeva, Alena Y. Varizhuk, Anna M. Podgorny, Oleg V. Piatkevich, Kiryl D. Patrushev, Maxim V. Boyko, Konstantin M. Subach, Fedor V. FEBS Open Bio Research Articles Genetically encoded calcium indicators based on truncated troponin C are attractive probes for calcium imaging due to their relatively small molecular size and twofold reduced calcium ion buffering. However, the best‐suited members of this family, YTnC and cNTnC, suffer from low molecular brightness, limited dynamic range, and/or poor sensitivity to calcium transients in neurons. To overcome these limitations, we developed an enhanced version of YTnC, named YTnC2. Compared with YTnC, YTnC2 had 5.7‐fold higher molecular brightness and 6.4‐fold increased dynamic range in vitro. YTnC2 was successfully used to reveal calcium transients in the cytosol and in the lumen of mitochondria of both mammalian cells and cultured neurons. Finally, we obtained and analyzed the crystal structure of the fluorescent domain of the YTnC2 mutant. John Wiley and Sons Inc. 2023-09-20 /pmc/articles/PMC10626279/ /pubmed/37650870 http://dx.doi.org/10.1002/2211-5463.13702 Text en © 2023 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Subach, Oksana M.
Vlaskina, Anna V.
Agapova, Yulia K.
Nikolaeva, Alena Y.
Varizhuk, Anna M.
Podgorny, Oleg V.
Piatkevich, Kiryl D.
Patrushev, Maxim V.
Boyko, Konstantin M.
Subach, Fedor V.
YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C
title YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C
title_full YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C
title_fullStr YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C
title_full_unstemmed YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C
title_short YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C
title_sort ytnc2, an improved genetically encoded green calcium indicator based on toadfish troponin c
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10626279/
https://www.ncbi.nlm.nih.gov/pubmed/37650870
http://dx.doi.org/10.1002/2211-5463.13702
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