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A Quasi Time-Reversible Scheme Based on Density Matrix Extrapolation on the Grassmann Manifold for Born–Oppenheimer Molecular Dynamics
[Image: see text] This Letter introduces the so-called Quasi Time-Reversible scheme based on Grassmann extrapolation (QTR G-Ext) of density matrices for an accurate calculation of initial guesses in Born–Oppenheimer Molecular Dynamics (BOMD) simulations. The method shows excellent results on four la...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10626629/ https://www.ncbi.nlm.nih.gov/pubmed/37879072 http://dx.doi.org/10.1021/acs.jpclett.3c02098 |
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author | Pes, Federica Polack, Étienne Mazzeo, Patrizia Dusson, Geneviève Stamm, Benjamin Lipparini, Filippo |
author_facet | Pes, Federica Polack, Étienne Mazzeo, Patrizia Dusson, Geneviève Stamm, Benjamin Lipparini, Filippo |
author_sort | Pes, Federica |
collection | PubMed |
description | [Image: see text] This Letter introduces the so-called Quasi Time-Reversible scheme based on Grassmann extrapolation (QTR G-Ext) of density matrices for an accurate calculation of initial guesses in Born–Oppenheimer Molecular Dynamics (BOMD) simulations. The method shows excellent results on four large molecular systems that are representative of real-life production applications, ranging from 21 to 94 atoms simulated with Kohn–Sham (KS) density functional theory surrounded with a classical environment with 6k to 16k atoms. Namely, it clearly reduces the number of self-consistent field iterations while at the same time achieving energy-conserving simulations, resulting in a considerable speed-up of BOMD simulations even when tight convergence of the KS equations is required. |
format | Online Article Text |
id | pubmed-10626629 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-106266292023-11-07 A Quasi Time-Reversible Scheme Based on Density Matrix Extrapolation on the Grassmann Manifold for Born–Oppenheimer Molecular Dynamics Pes, Federica Polack, Étienne Mazzeo, Patrizia Dusson, Geneviève Stamm, Benjamin Lipparini, Filippo J Phys Chem Lett [Image: see text] This Letter introduces the so-called Quasi Time-Reversible scheme based on Grassmann extrapolation (QTR G-Ext) of density matrices for an accurate calculation of initial guesses in Born–Oppenheimer Molecular Dynamics (BOMD) simulations. The method shows excellent results on four large molecular systems that are representative of real-life production applications, ranging from 21 to 94 atoms simulated with Kohn–Sham (KS) density functional theory surrounded with a classical environment with 6k to 16k atoms. Namely, it clearly reduces the number of self-consistent field iterations while at the same time achieving energy-conserving simulations, resulting in a considerable speed-up of BOMD simulations even when tight convergence of the KS equations is required. American Chemical Society 2023-10-25 /pmc/articles/PMC10626629/ /pubmed/37879072 http://dx.doi.org/10.1021/acs.jpclett.3c02098 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Pes, Federica Polack, Étienne Mazzeo, Patrizia Dusson, Geneviève Stamm, Benjamin Lipparini, Filippo A Quasi Time-Reversible Scheme Based on Density Matrix Extrapolation on the Grassmann Manifold for Born–Oppenheimer Molecular Dynamics |
title | A Quasi Time-Reversible
Scheme Based on Density Matrix
Extrapolation on the Grassmann Manifold for Born–Oppenheimer
Molecular Dynamics |
title_full | A Quasi Time-Reversible
Scheme Based on Density Matrix
Extrapolation on the Grassmann Manifold for Born–Oppenheimer
Molecular Dynamics |
title_fullStr | A Quasi Time-Reversible
Scheme Based on Density Matrix
Extrapolation on the Grassmann Manifold for Born–Oppenheimer
Molecular Dynamics |
title_full_unstemmed | A Quasi Time-Reversible
Scheme Based on Density Matrix
Extrapolation on the Grassmann Manifold for Born–Oppenheimer
Molecular Dynamics |
title_short | A Quasi Time-Reversible
Scheme Based on Density Matrix
Extrapolation on the Grassmann Manifold for Born–Oppenheimer
Molecular Dynamics |
title_sort | quasi time-reversible
scheme based on density matrix
extrapolation on the grassmann manifold for born–oppenheimer
molecular dynamics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10626629/ https://www.ncbi.nlm.nih.gov/pubmed/37879072 http://dx.doi.org/10.1021/acs.jpclett.3c02098 |
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