Cargando…

A deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images

OBJECTIVE: Using two three-dimensional U-Net architectures for myocardium structure extraction and a distance transformation algorithm specifically for the left circumflex artery, we have designed a fully automated algorithm for coronary artery labeling in coronary computed tomography angiography (C...

Descripción completa

Detalles Bibliográficos
Autores principales: Ren, Pengling, He, Yi, Guo, Ning, Luo, Nan, Li, Fang, Wang, Zhenchang, Yang, Zhenghan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10626726/
https://www.ncbi.nlm.nih.gov/pubmed/37932709
http://dx.doi.org/10.1186/s12911-023-02332-y
_version_ 1785131397194711040
author Ren, Pengling
He, Yi
Guo, Ning
Luo, Nan
Li, Fang
Wang, Zhenchang
Yang, Zhenghan
author_facet Ren, Pengling
He, Yi
Guo, Ning
Luo, Nan
Li, Fang
Wang, Zhenchang
Yang, Zhenghan
author_sort Ren, Pengling
collection PubMed
description OBJECTIVE: Using two three-dimensional U-Net architectures for myocardium structure extraction and a distance transformation algorithm specifically for the left circumflex artery, we have designed a fully automated algorithm for coronary artery labeling in coronary computed tomography angiography (CCTA) images. METHODS: In this retrospective analysis, a cohort of 157 patients who had undergone coronary computed tomography angiography (CCTA) was included. An automated coronary artery labeling algorithm was developed using a distance transformation approach to delineate the anatomical segments along the centerlines extracted from the CCTA images. A total of 16 segments were successfully identified and labeled. The algorithm’s outcomes were recorded and reviewed by three experts, and the performance of segment detection and labeling was assessed. Additionally, the level of agreement in manually labeled segments between two experts was quantified. RESULTS: When comparing the labels generated by the experts with those produced by the algorithm, it was necessary to modify or eliminate 117 labels (5.4%) out of 2180 segments assigned by the algorithm. The overall accuracy for label presence was 96.2%, with an average overlap of 94.0% between the expert reference and algorithm-generated labels. Furthermore, the average agreement rate between the two experts stood at 95.0%. CONCLUSIONS: Based on the labels of the clinical experts, the proposed deep learning algorithm exhibits high accuracy for automatic labeling. Therefore, our proposed method exhibits promising results for the automatic labeling of the coronary arteries and will alleviate the burden on radiologists in the near future.
format Online
Article
Text
id pubmed-10626726
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-106267262023-11-07 A deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images Ren, Pengling He, Yi Guo, Ning Luo, Nan Li, Fang Wang, Zhenchang Yang, Zhenghan BMC Med Inform Decis Mak Research OBJECTIVE: Using two three-dimensional U-Net architectures for myocardium structure extraction and a distance transformation algorithm specifically for the left circumflex artery, we have designed a fully automated algorithm for coronary artery labeling in coronary computed tomography angiography (CCTA) images. METHODS: In this retrospective analysis, a cohort of 157 patients who had undergone coronary computed tomography angiography (CCTA) was included. An automated coronary artery labeling algorithm was developed using a distance transformation approach to delineate the anatomical segments along the centerlines extracted from the CCTA images. A total of 16 segments were successfully identified and labeled. The algorithm’s outcomes were recorded and reviewed by three experts, and the performance of segment detection and labeling was assessed. Additionally, the level of agreement in manually labeled segments between two experts was quantified. RESULTS: When comparing the labels generated by the experts with those produced by the algorithm, it was necessary to modify or eliminate 117 labels (5.4%) out of 2180 segments assigned by the algorithm. The overall accuracy for label presence was 96.2%, with an average overlap of 94.0% between the expert reference and algorithm-generated labels. Furthermore, the average agreement rate between the two experts stood at 95.0%. CONCLUSIONS: Based on the labels of the clinical experts, the proposed deep learning algorithm exhibits high accuracy for automatic labeling. Therefore, our proposed method exhibits promising results for the automatic labeling of the coronary arteries and will alleviate the burden on radiologists in the near future. BioMed Central 2023-11-06 /pmc/articles/PMC10626726/ /pubmed/37932709 http://dx.doi.org/10.1186/s12911-023-02332-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Ren, Pengling
He, Yi
Guo, Ning
Luo, Nan
Li, Fang
Wang, Zhenchang
Yang, Zhenghan
A deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images
title A deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images
title_full A deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images
title_fullStr A deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images
title_full_unstemmed A deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images
title_short A deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images
title_sort deep learning-based automated algorithm for labeling coronary arteries in computed tomography angiography images
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10626726/
https://www.ncbi.nlm.nih.gov/pubmed/37932709
http://dx.doi.org/10.1186/s12911-023-02332-y
work_keys_str_mv AT renpengling adeeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT heyi adeeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT guoning adeeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT luonan adeeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT lifang adeeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT wangzhenchang adeeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT yangzhenghan adeeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT renpengling deeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT heyi deeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT guoning deeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT luonan deeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT lifang deeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT wangzhenchang deeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages
AT yangzhenghan deeplearningbasedautomatedalgorithmforlabelingcoronaryarteriesincomputedtomographyangiographyimages