Cargando…

Development of simple sequence repeat markers for sugarcane from data mining of expressed sequence tags

Sugarcane (Saccharum spp. hybrids) is a worldwide acclaimed important agricultural crop used primarily for sugar production and biofuel. Sugarcane’s genetic complexity, aneuploidy, and extreme heterozygosity make it a challenging crop in developing improved varieties. The molecular breeding programs...

Descripción completa

Detalles Bibliográficos
Autores principales:	Jiang, Huahao, Waseem, Muhammad, Wang, Yong, Basharat, Sana, Zhang, Xia, Li, Yun, Liu, Pingwu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2023
Materias:	Plant Science
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10627005/ https://www.ncbi.nlm.nih.gov/pubmed/37936931 http://dx.doi.org/10.3389/fpls.2023.1199210

Ejemplares similares

Development and Application of Fruit Color-Related Expressed Sequence Tag-Simple Sequence Repeat Markers in Abelmoschus esculentus on the Basis of Transcriptome Sequencing
por: An, Xia, et al.
Publicado: (2022)

The First Molecular Identification of an Olive Collection Applying Standard Simple Sequence Repeats and Novel Expressed Sequence Tag Markers
por: Mousavi, Soraya, et al.
Publicado: (2017)

Novel Expressed Sequence Tag-Derived and Other Genomic Simple Sequence Repeat Markers Revealed Genetic Diversity in Ethiopian Finger Millet Landrace Populations and Cultivars
por: Brhane, Haftom, et al.
Publicado: (2021)

A PacBio single molecule real-time sequencing-based full-length transcriptome atlas of tree tomato (Solanum betaceum Cav.) and mining of simple sequence repeat markers
por: Deng, Honghong, et al.
Publicado: (2022)

Development and mapping of Simple Sequence Repeat markers for pearl millet from data mining of Expressed Sequence Tags
por: Senthilvel, S, et al.
Publicado: (2008)

Complete Chloroplast Genome of the Inverted Repeat-Lacking Species Vicia bungei and Development of Polymorphic Simple Sequence Repeat Markers
por: Jo, Ick-Hyun, et al.
Publicado: (2022)

Genetic Diversity and Structure of Lolium Species Surveyed on Nuclear Simple Sequence Repeat and Cytoplasmic Markers
por: Guan, Xuanli, et al.
Publicado: (2017)

Development of expressed sequence tag and expressed sequence tag–simple sequence repeat marker resources for Musa acuminata
por: Passos, Marco A. N., et al.
Publicado: (2012)

Analysis of the genetic diversity and population structure of Salix psammophila based on phenotypic traits and simple sequence repeat markers
por: Hao, Lei, et al.
Publicado: (2019)

Genetic Variation and Association Mapping of Seed-Related Traits in Cultivated Peanut (Arachis hypogaea L.) Using Single-Locus Simple Sequence Repeat Markers
por: Zhao, Jiaojiao, et al.
Publicado: (2017)

Editorial: Salinity and drought stress in plants: understanding physiological, biochemical and molecular responses
por: Waseem, Muhammad, et al.
Publicado: (2023)

Development of genome-wide informative simple sequence repeat markers for large-scale genotyping applications in chickpea and development of web resource
por: Parida, Swarup K., et al.
Publicado: (2015)

Cytogenetic Diversity of Simple Sequences Repeats in Morphotypes of Brassica rapa ssp. chinensis
por: Zheng, Jin-shuang, et al.
Publicado: (2016)

Genome-Wide Analysis of Simple Sequence Repeats in Bitter Gourd (Momordica charantia)
por: Cui, Junjie, et al.
Publicado: (2017)

Genome-Wide Analysis of Simple Sequence Repeats in Cabbage (Brassica oleracea L.)
por: Xu, Yuanyuan, et al.
Publicado: (2021)

New Sources of Eastern Filbert Blight Resistance and Simple Sequence Repeat Markers on Linkage Group 6 in Hazelnut (Corylus avellana L.)
por: Komaei Koma, Golnaz, et al.
Publicado: (2021)

A blackberry (Rubus L.) expressed sequence tag library for the development of simple sequence repeat markers
por: Lewers, Kim S, et al.
Publicado: (2008)

Mining of simple sequence repeats in the Genome of Gentianaceae
por: Sathishkumar, R., et al.
Publicado: (2011)

BAC-Pool Sequencing and Assembly of 19 Mb of the Complex Sugarcane Genome
por: Okura, Vagner Katsumi, et al.
Publicado: (2016)

Characterization of Microsatellites in the Akebia trifoliata Genome and Their Transferability and Development of a Whole Set of Effective, Polymorphic, and Physically Mapped Simple Sequence Repeat Markers
por: Zhong, Shengfu, et al.
Publicado: (2022)

Characterization of Simple Sequence Repeat (SSR) Markers Mined in Whole Grape Genomes
por: Pei, Dan, et al.
Publicado: (2023)

Genetic Mapping of the Incompatibility Locus in Olive and Development of a Linked Sequence-Tagged Site Marker
por: Mariotti, Roberto, et al.
Publicado: (2020)

Sixteen Polymorphic Simple Sequence Repeat Markers from Expressed Sequence Tags of the Chinese Mitten Crab Eriocheir sinensis
por: Gao, Xiang-Gang, et al.
Publicado: (2010)

Efficient shoot regeneration of medicinal plant Haplophyllum tuberculatum by direct and indirect organogenesis and genetic fidelity assessment using Inter Simple Sequence Repeats markers
por: Alsafran, Mohammed, et al.
Publicado: (2022)

Expressed sequence tags (ESTs) and simple sequence repeat (SSR) markers from octoploid strawberry (Fragaria × ananassa)
por: Folta, Kevin M, et al.
Publicado: (2005)

Analysis of expressed sequence tags from Prunus mume flower and fruit and development of simple sequence repeat markers
por: Li, Xiaoying, et al.
Publicado: (2010)

Identification of simple sequence repeat markers linked to heat tolerance in rice using bulked segregant analysis in F(2) population of NERICA-L 44 × Uma
por: Stephen, K., et al.
Publicado: (2023)

Genomic Prediction of Kernel Zinc Concentration in Multiple Maize Populations Using Genotyping-by-Sequencing and Repeat Amplification Sequencing Markers
por: Guo, Rui, et al.
Publicado: (2020)

“Targeted Sequencing by Gene Synteny,” a New Strategy for Polyploid Species: Sequencing and Physical Structure of a Complex Sugarcane Region
por: Mancini, Melina C., et al.
Publicado: (2018)

Comprehensive Characterization of Simple Sequence Repeats in Eggplant (Solanum melongena L.) Genome and Construction of a Web Resource
por: Portis, Ezio, et al.
Publicado: (2018)

Large-scale development of expressed sequence tag-derived simple sequence repeat markers and diversity analysis in Arachis spp.
por: Koilkonda, Padmalatha, et al.
Publicado: (2011)

Developing expressed sequence tag libraries and the discovery of simple sequence repeat markers for two species of raspberry (Rubus L.)
por: Bushakra, Jill M., et al.
Publicado: (2015)

Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneum
por: Thirugnanasambandam, Prathima Perumal, et al.
Publicado: (2023)

The Complete Mitogenome of Elymus sibiricus and Insights Into Its Evolutionary Pattern Based on Simple Repeat Sequences of Seed Plant Mitogenomes
por: Xiong, Yanli, et al.
Publicado: (2022)

Occurrence of simple sequence repeats in cDNA sequences of safflower (Carthamus tinctorius) reveals the importance of SSR-containing genes for cell biology and dynamic response to environmental cues
por: Ahmadi, Ahmad Jawid, et al.
Publicado: (2022)

Development of Sequence-Tagged Site Marker Set for Identification of J, J(S), and St Sub-genomes of Thinopyrum intermedium in Wheat Background
por: Qiao, Linyi, et al.
Publicado: (2021)

Diversity Analysis in Cannabis sativa Based on Large-Scale Development of Expressed Sequence Tag-Derived Simple Sequence Repeat Markers
por: Gao, Chunsheng, et al.
Publicado: (2014)

Simple sequence repeat marker development from bacterial artificial chromosome end sequences and expressed sequence tags of flax (Linum usitatissimum L.)
por: Cloutier, Sylvie, et al.
Publicado: (2012)

Assessment of genetic diversity in Salvadora persica L. based on inter simple sequence repeat (ISSR) genetic marker
por: Monfared, Mohammad Asadi, et al.
Publicado: (2018)

Validation of candidate gene-based EST-SSR markers for sugar yield in sugarcane
por: Divakar, S., et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_olpmvdnk9ggpu04b32pm1gdbqe