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Avoiding inferior clusterings with misspecified Gaussian mixture models
Clustering is a fundamental tool for exploratory data analysis, and is ubiquitous across scientific disciplines. Gaussian Mixture Model (GMM) is a popular probabilistic and interpretable model for clustering. In many practical settings, the true data distribution, which is unknown, may be non-Gaussi...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10628229/ https://www.ncbi.nlm.nih.gov/pubmed/37932317 http://dx.doi.org/10.1038/s41598-023-44608-3 |
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author | Kasa, Siva Rajesh Rajan, Vaibhav |
author_facet | Kasa, Siva Rajesh Rajan, Vaibhav |
author_sort | Kasa, Siva Rajesh |
collection | PubMed |
description | Clustering is a fundamental tool for exploratory data analysis, and is ubiquitous across scientific disciplines. Gaussian Mixture Model (GMM) is a popular probabilistic and interpretable model for clustering. In many practical settings, the true data distribution, which is unknown, may be non-Gaussian and may be contaminated by noise or outliers. In such cases, clustering may still be done with a misspecified GMM. However, this may lead to incorrect classification of the underlying subpopulations. In this paper, we identify and characterize the problem of inferior clustering solutions. Similar to well-known spurious solutions, these inferior solutions have high likelihood and poor cluster interpretation; however, they differ from spurious solutions in other characteristics, such as asymmetry in the fitted components. We theoretically analyze this asymmetry and its relation to misspecification. We propose a new penalty term that is designed to avoid both inferior and spurious solutions. Using this penalty term, we develop a new model selection criterion and a new GMM-based clustering algorithm, SIA. We empirically demonstrate that, in cases of misspecification, SIA avoids inferior solutions and outperforms previous GMM-based clustering methods. |
format | Online Article Text |
id | pubmed-10628229 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106282292023-11-08 Avoiding inferior clusterings with misspecified Gaussian mixture models Kasa, Siva Rajesh Rajan, Vaibhav Sci Rep Article Clustering is a fundamental tool for exploratory data analysis, and is ubiquitous across scientific disciplines. Gaussian Mixture Model (GMM) is a popular probabilistic and interpretable model for clustering. In many practical settings, the true data distribution, which is unknown, may be non-Gaussian and may be contaminated by noise or outliers. In such cases, clustering may still be done with a misspecified GMM. However, this may lead to incorrect classification of the underlying subpopulations. In this paper, we identify and characterize the problem of inferior clustering solutions. Similar to well-known spurious solutions, these inferior solutions have high likelihood and poor cluster interpretation; however, they differ from spurious solutions in other characteristics, such as asymmetry in the fitted components. We theoretically analyze this asymmetry and its relation to misspecification. We propose a new penalty term that is designed to avoid both inferior and spurious solutions. Using this penalty term, we develop a new model selection criterion and a new GMM-based clustering algorithm, SIA. We empirically demonstrate that, in cases of misspecification, SIA avoids inferior solutions and outperforms previous GMM-based clustering methods. Nature Publishing Group UK 2023-11-06 /pmc/articles/PMC10628229/ /pubmed/37932317 http://dx.doi.org/10.1038/s41598-023-44608-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kasa, Siva Rajesh Rajan, Vaibhav Avoiding inferior clusterings with misspecified Gaussian mixture models |
title | Avoiding inferior clusterings with misspecified Gaussian mixture models |
title_full | Avoiding inferior clusterings with misspecified Gaussian mixture models |
title_fullStr | Avoiding inferior clusterings with misspecified Gaussian mixture models |
title_full_unstemmed | Avoiding inferior clusterings with misspecified Gaussian mixture models |
title_short | Avoiding inferior clusterings with misspecified Gaussian mixture models |
title_sort | avoiding inferior clusterings with misspecified gaussian mixture models |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10628229/ https://www.ncbi.nlm.nih.gov/pubmed/37932317 http://dx.doi.org/10.1038/s41598-023-44608-3 |
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