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SPOP regulates the expression profiles and alternative splicing events in human hepatocytes

Speckle type BTB/POZ protein (SPOP) may have cancer promoting or inhibiting effects. At present, the role of SPOP in hepatocellular carcinoma (HCC) has rarely been studied. In this study, to investigate the effects of SPOP in HCC and elucidate the underlying molecular mechanisms of its relationship...

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Autores principales: Dai, Jing, Dong, Xiang, Chen, Yuxin, Xue, Wanying, Wang, Qingqing, Shang, Feifei, Zhao, Yunxia, Li, Shujing, Gao, Yu, Wang, Yuanyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: De Gruyter 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10628592/
https://www.ncbi.nlm.nih.gov/pubmed/37941785
http://dx.doi.org/10.1515/biol-2022-0755
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author Dai, Jing
Dong, Xiang
Chen, Yuxin
Xue, Wanying
Wang, Qingqing
Shang, Feifei
Zhao, Yunxia
Li, Shujing
Gao, Yu
Wang, Yuanyuan
author_facet Dai, Jing
Dong, Xiang
Chen, Yuxin
Xue, Wanying
Wang, Qingqing
Shang, Feifei
Zhao, Yunxia
Li, Shujing
Gao, Yu
Wang, Yuanyuan
author_sort Dai, Jing
collection PubMed
description Speckle type BTB/POZ protein (SPOP) may have cancer promoting or inhibiting effects. At present, the role of SPOP in hepatocellular carcinoma (HCC) has rarely been studied. In this study, to investigate the effects of SPOP in HCC and elucidate the underlying molecular mechanisms of its relationship with genes, differentially expressed genes (DEGs) were classified through RNA sequencing. The gene ontology analysis and Kyoto Encyclopedia of Genes and Genomes functional pathway analysis were used to further predict the function of DEGs after the overexpression of SPOP. The biological function of SPOP-regulated alternative splicing events in cells is comprehensively assessed. The Cancer Genome Atlas database and Gene Expression Omnibus dataset were performed to evaluate the correlation between SPOP and HCC progression. Due to SPOP overexpression, 56 DEGs in the HCC related pathway were further identified. The results showed that SPOP overexpression facilitated the cell proliferation and changed the gene expression profiles of human normal hepatocytes. SPOP-regulated alternative splicing events were involved in pathways associated with cellular processes, metabolism, environmental information procession, organismal systems, and so on. In conclusion, SPOP may potentially exhibit tumor-promoting effects, necessitating further investigations to unveil its molecular mechanisms comprehensively.
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spelling pubmed-106285922023-11-08 SPOP regulates the expression profiles and alternative splicing events in human hepatocytes Dai, Jing Dong, Xiang Chen, Yuxin Xue, Wanying Wang, Qingqing Shang, Feifei Zhao, Yunxia Li, Shujing Gao, Yu Wang, Yuanyuan Open Life Sci Research Article Speckle type BTB/POZ protein (SPOP) may have cancer promoting or inhibiting effects. At present, the role of SPOP in hepatocellular carcinoma (HCC) has rarely been studied. In this study, to investigate the effects of SPOP in HCC and elucidate the underlying molecular mechanisms of its relationship with genes, differentially expressed genes (DEGs) were classified through RNA sequencing. The gene ontology analysis and Kyoto Encyclopedia of Genes and Genomes functional pathway analysis were used to further predict the function of DEGs after the overexpression of SPOP. The biological function of SPOP-regulated alternative splicing events in cells is comprehensively assessed. The Cancer Genome Atlas database and Gene Expression Omnibus dataset were performed to evaluate the correlation between SPOP and HCC progression. Due to SPOP overexpression, 56 DEGs in the HCC related pathway were further identified. The results showed that SPOP overexpression facilitated the cell proliferation and changed the gene expression profiles of human normal hepatocytes. SPOP-regulated alternative splicing events were involved in pathways associated with cellular processes, metabolism, environmental information procession, organismal systems, and so on. In conclusion, SPOP may potentially exhibit tumor-promoting effects, necessitating further investigations to unveil its molecular mechanisms comprehensively. De Gruyter 2023-10-24 /pmc/articles/PMC10628592/ /pubmed/37941785 http://dx.doi.org/10.1515/biol-2022-0755 Text en © 2023 the author(s), published by De Gruyter https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License.
spellingShingle Research Article
Dai, Jing
Dong, Xiang
Chen, Yuxin
Xue, Wanying
Wang, Qingqing
Shang, Feifei
Zhao, Yunxia
Li, Shujing
Gao, Yu
Wang, Yuanyuan
SPOP regulates the expression profiles and alternative splicing events in human hepatocytes
title SPOP regulates the expression profiles and alternative splicing events in human hepatocytes
title_full SPOP regulates the expression profiles and alternative splicing events in human hepatocytes
title_fullStr SPOP regulates the expression profiles and alternative splicing events in human hepatocytes
title_full_unstemmed SPOP regulates the expression profiles and alternative splicing events in human hepatocytes
title_short SPOP regulates the expression profiles and alternative splicing events in human hepatocytes
title_sort spop regulates the expression profiles and alternative splicing events in human hepatocytes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10628592/
https://www.ncbi.nlm.nih.gov/pubmed/37941785
http://dx.doi.org/10.1515/biol-2022-0755
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