Cargando…
ScanNeo2: a comprehensive workflow for neoantigen detection and immunogenicity prediction from diverse genomic and transcriptomic alterations
MOTIVATION: Neoantigens, tumor-specific protein fragments, are invaluable in cancer immunotherapy due to their ability to serve as targets for the immune system. Computational prediction of these neoantigens from sequencing data often requires multiple algorithms and sophisticated workflows, which a...
Autores principales: | Schäfer, Richard A, Guo, Qingxiang, Yang, Rendong |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10629934/ https://www.ncbi.nlm.nih.gov/pubmed/37882750 http://dx.doi.org/10.1093/bioinformatics/btad659 |
Ejemplares similares
-
Integrated protocol for exitron and exitron-derived neoantigen identification using human RNA-seq data with ScanExitron and ScanNeo
por: Wang, Ting-You, et al.
Publicado: (2021) -
NeoFox: annotating neoantigen candidates with neoantigen features
por: Lang, Franziska, et al.
Publicado: (2021) -
INTEGRATE-neo: a pipeline for personalized gene fusion neoantigen discovery
por: Zhang, Jin, et al.
Publicado: (2017) -
NeoFuse: predicting fusion neoantigens from RNA sequencing data
por: Fotakis, Georgios, et al.
Publicado: (2020) -
CloudNeo: a cloud pipeline for identifying patient-specific tumor neoantigens
por: Bais, Preeti, et al.
Publicado: (2017)