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Fast and robust metagenomic sequence comparison through sparse chaining with skani

Sequence comparison tools for metagenome-assembled genomes (MAGs) struggle with high-volume or low-quality data. We present skani (https://github.com/bluenote-1577/skani), a method for determining average nucleotide identity (ANI) via sparse approximate alignments. skani outperforms FastANI in accur...

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Detalles Bibliográficos
Autores principales:	Shaw, Jim, Yu, Yun William
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group US 2023
Materias:	Brief Communication
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10630134/ https://www.ncbi.nlm.nih.gov/pubmed/37735570 http://dx.doi.org/10.1038/s41592-023-02018-3

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