Cargando…

OPUS-DSD: deep structural disentanglement for cryo-EM single-particle analysis

Cryo-electron microscopy (cryo-EM) captures snapshots of dynamic macromolecules, collectively illustrating the involved structural landscapes. This provides an exciting opportunity to explore the structural variations of macromolecules under study. However, traditional cryo-EM single-particle analys...

Descripción completa

Detalles Bibliográficos
Autores principales:	Luo, Zhenwei, Ni, Fengyun, Wang, Qinghua, Ma, Jianpeng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group US 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10630141/ https://www.ncbi.nlm.nih.gov/pubmed/37813988 http://dx.doi.org/10.1038/s41592-023-02031-6

Ejemplares similares

Sparseness and Smoothness Regularized Imaging for improving the resolution of Cryo-EM single-particle reconstruction
por: Luo, Zhenwei, et al.
Publicado: (2021)

DeepCryoPicker: fully automated deep neural network for single protein particle picking in cryo-EM
por: Al-Azzawi, Adil, et al.
Publicado: (2020)

Single-particle cryo-EM: beyond the resolution
por: Armache, Jean-Paul, et al.
Publicado: (2019)

Benchmarking cryo-EM Single Particle Analysis Workflow
por: Kim, Laura Y., et al.
Publicado: (2018)

A potential difference for single-particle cryo-EM
por: Rosenthal, Peter B.
Publicado: (2019)

OPUS-Rota4: a gradient-based protein side-chain modeling framework assisted by deep learning-based predictors
por: Xu, Gang, et al.
Publicado: (2021)

Cryo-EM Structure of a Begomovirus Geminate Particle
por: Xu, Xiongbiao, et al.
Publicado: (2019)

OPUS‐CSF: A C‐atom‐based scoring function for ranking protein structural models
por: Xu, Gang, et al.
Publicado: (2017)

Structure of the Insulin Receptor-Insulin Complex by Single Particle CryoEM analysis
por: Scapin, Giovanna, et al.
Publicado: (2018)

Cryo-EM single-particle structure refinement and map calculation using Servalcat
por: Yamashita, Keitaro, et al.
Publicado: (2021)

OPUS-Mut: Studying the Effect of Protein Mutation through Side-Chain Modeling
por: Xu, Gang, et al.
Publicado: (2023)

Expression of Concern to: OPUS-Rota4: a gradient-based protein side-chain modeling framework assisted by deep learning-based predictors
por: Xu, Gang, et al.
Publicado: (2022)

Cryo-EM single particle analysis with the Volta phase plate
por: Danev, Radostin, et al.
Publicado: (2016)

Towards automating single-particle cryo-EM data acquisition
por: Dienemann, Christian
Publicado: (2023)

Preparation of scFv stabilized chromatosomes for single-particle cryo-EM structure determination
por: Zhou, Bing-Rui, et al.
Publicado: (2021)

Single particle cryo-EM structure of the outer hair cell motor protein prestin
por: Butan, Carmen, et al.
Publicado: (2022)

Coma-corrected rapid single-particle cryo-EM data collection on the CRYO ARM 300
por: Efremov, Rouslan G., et al.
Publicado: (2021)

OPUS-X: an open-source toolkit for protein torsion angles, secondary structure, solvent accessibility, contact map predictions and 3D folding
por: Xu, Gang, et al.
Publicado: (2021)

Single-Particle Cryo-EM of the Ryanodine Receptor Channel in an Aqueous Environment
por: Baker, Mariah R., et al.
Publicado: (2015)

Routine single particle CryoEM sample and grid characterization by tomography
por: Noble, Alex J, et al.
Publicado: (2018)

Could Egg White Lysozyme be Solved by Single Particle Cryo-EM?
por: Zhang, Y., et al.
Publicado: (2020)

Single-particle cryo-EM: alternative schemes to improve dose efficiency
por: Zhang, Yue, et al.
Publicado: (2021)

Classifying liganded states in heterogeneous single-particle cryo-EM datasets
por: Arnold, William R, et al.
Publicado: (2022)

Emerging Themes in CryoEM—Single Particle Analysis Image Processing
por: Vilas, Jose Luis, et al.
Publicado: (2022)

Recent Technical Advances in Sample Preparation for Single-Particle Cryo-EM
por: Xu, Yixin, et al.
Publicado: (2022)

Measuring the effects of ice thickness on resolution in single particle cryo-EM
por: Neselu, Kasahun, et al.
Publicado: (2023)

Functionalized graphene grids with various charges for single-particle cryo-EM
por: Lu, Ye, et al.
Publicado: (2022)

Cryo-EM Structure of the Exocyst Complex
por: Mei, Kunrong, et al.
Publicado: (2018)

Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs
por: Matthies, Doreen, et al.
Publicado: (2018)

Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris haemoglobin
por: Afanasyev, Pavel, et al.
Publicado: (2017)

Subnanometer-resolution structure determination in situ by hybrid subtomogram averaging - single particle cryo-EM
por: Sanchez, Ricardo M., et al.
Publicado: (2020)

Single-particle cryo-EM structures from iDPC–STEM at near-atomic resolution
por: Lazić, Ivan, et al.
Publicado: (2022)

Improving Resolution and Resolvability of Single Particle CryoEM Structures using Gaussian Mixture Models
por: Chen, Muyuan, et al.
Publicado: (2023)

Cryo-EM advances in RNA structure determination
por: Ma, Haiyun, et al.
Publicado: (2022)

Using the Volta phase plate with defocus for cryo-EM single particle analysis
por: Danev, Radostin, et al.
Publicado: (2017)

Cryo-EM Grid Preparation of Membrane Protein Samples for Single Particle Analysis
por: Sgro, Germán G., et al.
Publicado: (2018)

New Opportunities Created by Single-Particle Cryo-EM: The Mapping of Conformational Space
por: Frank, Joachim
Publicado: (2018)

A case for glycerol as an acceptable additive for single-particle cryoEM samples
por: Basanta, Benjamin, et al.
Publicado: (2022)

Data-driven determination of number of discrete conformations in single-particle cryo-EM
por: Zhou, Ye, et al.
Publicado: (2022)

AutoCryoPicker: an unsupervised learning approach for fully automated single particle picking in Cryo-EM images
por: Al-Azzawi, Adil, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_h062nrreon7o2dsfsvei9kc69m