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Identification of serum miR-1246 and miR-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer

Epithelial ovarian cancer (EOC) is one of the leading cancers in women, with high-grade serous ovarian cancer (HGSOC) being the most common and lethal subtype of this disease. A vast majority of HGSOC are diagnosed at the late stage of the disease when the treatment and total recovery chances are lo...

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Autores principales: Niemira, Magdalena, Erol, Anna, Bielska, Agnieszka, Zeller, Anna, Skwarska, Anna, Chwialkowska, Karolina, Kuzmicki, Mariusz, Szamatowicz, Jacek, Reszec, Joanna, Knapp, Pawel, Moniuszko, Marcin, Kretowski, Adam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10630404/
https://www.ncbi.nlm.nih.gov/pubmed/37935712
http://dx.doi.org/10.1038/s41598-023-45317-7
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author Niemira, Magdalena
Erol, Anna
Bielska, Agnieszka
Zeller, Anna
Skwarska, Anna
Chwialkowska, Karolina
Kuzmicki, Mariusz
Szamatowicz, Jacek
Reszec, Joanna
Knapp, Pawel
Moniuszko, Marcin
Kretowski, Adam
author_facet Niemira, Magdalena
Erol, Anna
Bielska, Agnieszka
Zeller, Anna
Skwarska, Anna
Chwialkowska, Karolina
Kuzmicki, Mariusz
Szamatowicz, Jacek
Reszec, Joanna
Knapp, Pawel
Moniuszko, Marcin
Kretowski, Adam
author_sort Niemira, Magdalena
collection PubMed
description Epithelial ovarian cancer (EOC) is one of the leading cancers in women, with high-grade serous ovarian cancer (HGSOC) being the most common and lethal subtype of this disease. A vast majority of HGSOC are diagnosed at the late stage of the disease when the treatment and total recovery chances are low. Thus, there is an urgent need for novel, more sensitive and specific methods for early and routine HGSOC clinical diagnosis. In this study, we performed miRNA expression profiling using the NanoString miRNA assay in 34 serum samples from patients with HGSOC and 36 healthy women. We identified 13 miRNAs that were differentially expressed (DE). For additional exploration of expression patterns correlated with HGSOC, we performed weighted gene co-expression network analysis (WGCNA). As a result, we showed that the module most correlated with tumour size, nodule and metastasis contained 8 DE miRNAs. The panel including miR-1246 and miR-150-5p was identified as a signature that could discriminate HGSOC patients with AUCs of 0.98 and 1 for the training and test sets, respectively. Furthermore, the above two-miRNA panel had an AUC = 0.946 in the verification cohorts of RT-qPCR data and an AUC = 0.895 using external data from the GEO public database. Thus, the model we developed has the potential to markedly improve the diagnosis of ovarian cancer.
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spelling pubmed-106304042023-11-07 Identification of serum miR-1246 and miR-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer Niemira, Magdalena Erol, Anna Bielska, Agnieszka Zeller, Anna Skwarska, Anna Chwialkowska, Karolina Kuzmicki, Mariusz Szamatowicz, Jacek Reszec, Joanna Knapp, Pawel Moniuszko, Marcin Kretowski, Adam Sci Rep Article Epithelial ovarian cancer (EOC) is one of the leading cancers in women, with high-grade serous ovarian cancer (HGSOC) being the most common and lethal subtype of this disease. A vast majority of HGSOC are diagnosed at the late stage of the disease when the treatment and total recovery chances are low. Thus, there is an urgent need for novel, more sensitive and specific methods for early and routine HGSOC clinical diagnosis. In this study, we performed miRNA expression profiling using the NanoString miRNA assay in 34 serum samples from patients with HGSOC and 36 healthy women. We identified 13 miRNAs that were differentially expressed (DE). For additional exploration of expression patterns correlated with HGSOC, we performed weighted gene co-expression network analysis (WGCNA). As a result, we showed that the module most correlated with tumour size, nodule and metastasis contained 8 DE miRNAs. The panel including miR-1246 and miR-150-5p was identified as a signature that could discriminate HGSOC patients with AUCs of 0.98 and 1 for the training and test sets, respectively. Furthermore, the above two-miRNA panel had an AUC = 0.946 in the verification cohorts of RT-qPCR data and an AUC = 0.895 using external data from the GEO public database. Thus, the model we developed has the potential to markedly improve the diagnosis of ovarian cancer. Nature Publishing Group UK 2023-11-07 /pmc/articles/PMC10630404/ /pubmed/37935712 http://dx.doi.org/10.1038/s41598-023-45317-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Niemira, Magdalena
Erol, Anna
Bielska, Agnieszka
Zeller, Anna
Skwarska, Anna
Chwialkowska, Karolina
Kuzmicki, Mariusz
Szamatowicz, Jacek
Reszec, Joanna
Knapp, Pawel
Moniuszko, Marcin
Kretowski, Adam
Identification of serum miR-1246 and miR-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer
title Identification of serum miR-1246 and miR-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer
title_full Identification of serum miR-1246 and miR-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer
title_fullStr Identification of serum miR-1246 and miR-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer
title_full_unstemmed Identification of serum miR-1246 and miR-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer
title_short Identification of serum miR-1246 and miR-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer
title_sort identification of serum mir-1246 and mir-150-5p as novel diagnostic biomarkers for high-grade serous ovarian cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10630404/
https://www.ncbi.nlm.nih.gov/pubmed/37935712
http://dx.doi.org/10.1038/s41598-023-45317-7
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