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Large-scale annotation dataset for fetal head biometry in ultrasound images

This dataset features a collection of 3832 high-resolution ultrasound images, each with dimensions of 959×661 pixels, focused on Fetal heads. The images highlight specific anatomical regions: the brain, cavum septum pellucidum (CSP), and lateral ventricles (LV). The dataset was assembled under the C...

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Autores principales: Alzubaidi, Mahmood, Agus, Marco, Makhlouf, Michel, Anver, Fatima, Alyafei, Khalid, Househ, Mowafa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10630602/
https://www.ncbi.nlm.nih.gov/pubmed/38020431
http://dx.doi.org/10.1016/j.dib.2023.109708
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author Alzubaidi, Mahmood
Agus, Marco
Makhlouf, Michel
Anver, Fatima
Alyafei, Khalid
Househ, Mowafa
author_facet Alzubaidi, Mahmood
Agus, Marco
Makhlouf, Michel
Anver, Fatima
Alyafei, Khalid
Househ, Mowafa
author_sort Alzubaidi, Mahmood
collection PubMed
description This dataset features a collection of 3832 high-resolution ultrasound images, each with dimensions of 959×661 pixels, focused on Fetal heads. The images highlight specific anatomical regions: the brain, cavum septum pellucidum (CSP), and lateral ventricles (LV). The dataset was assembled under the Creative Commons Attribution 4.0 International license, using previously anonymized and de-identified images to maintain ethical standards. Each image is complemented by a CSV file detailing pixel size in millimeters (mm). For enhanced compatibility and usability, the dataset is available in 11 universally accepted formats, including Cityscapes, YOLO, CVAT, Datumaro, COCO, TFRecord, PASCAL, LabelMe, Segmentation mask, OpenImage, and ICDAR. This broad range of formats ensures adaptability for various computer vision tasks, such as classification, segmentation, and object detection. It is also compatible with multiple medical imaging software and deep learning frameworks. The reliability of the annotations is verified through a two-step validation process involving a Senior Attending Physician and a Radiologic Technologist. The Intraclass Correlation Coefficients (ICC) and Jaccard similarity indices (JS) are utilized to quantify inter-rater agreement. The dataset exhibits high annotation reliability, with ICC values averaging at 0.859 and 0.889, and JS values at 0.855 and 0.857 in two iterative rounds of annotation. This dataset is designed to be an invaluable resource for ongoing and future research projects in medical imaging and computer vision. It is particularly suited for applications in prenatal diagnostics, clinical diagnosis, and computer-assisted interventions. Its detailed annotations, broad compatibility, and ethical compliance make it a highly reusable and adaptable tool for the development of algorithms aimed at improving maternal and Fetal health.
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spelling pubmed-106306022023-10-20 Large-scale annotation dataset for fetal head biometry in ultrasound images Alzubaidi, Mahmood Agus, Marco Makhlouf, Michel Anver, Fatima Alyafei, Khalid Househ, Mowafa Data Brief Data Article This dataset features a collection of 3832 high-resolution ultrasound images, each with dimensions of 959×661 pixels, focused on Fetal heads. The images highlight specific anatomical regions: the brain, cavum septum pellucidum (CSP), and lateral ventricles (LV). The dataset was assembled under the Creative Commons Attribution 4.0 International license, using previously anonymized and de-identified images to maintain ethical standards. Each image is complemented by a CSV file detailing pixel size in millimeters (mm). For enhanced compatibility and usability, the dataset is available in 11 universally accepted formats, including Cityscapes, YOLO, CVAT, Datumaro, COCO, TFRecord, PASCAL, LabelMe, Segmentation mask, OpenImage, and ICDAR. This broad range of formats ensures adaptability for various computer vision tasks, such as classification, segmentation, and object detection. It is also compatible with multiple medical imaging software and deep learning frameworks. The reliability of the annotations is verified through a two-step validation process involving a Senior Attending Physician and a Radiologic Technologist. The Intraclass Correlation Coefficients (ICC) and Jaccard similarity indices (JS) are utilized to quantify inter-rater agreement. The dataset exhibits high annotation reliability, with ICC values averaging at 0.859 and 0.889, and JS values at 0.855 and 0.857 in two iterative rounds of annotation. This dataset is designed to be an invaluable resource for ongoing and future research projects in medical imaging and computer vision. It is particularly suited for applications in prenatal diagnostics, clinical diagnosis, and computer-assisted interventions. Its detailed annotations, broad compatibility, and ethical compliance make it a highly reusable and adaptable tool for the development of algorithms aimed at improving maternal and Fetal health. Elsevier 2023-10-20 /pmc/articles/PMC10630602/ /pubmed/38020431 http://dx.doi.org/10.1016/j.dib.2023.109708 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Alzubaidi, Mahmood
Agus, Marco
Makhlouf, Michel
Anver, Fatima
Alyafei, Khalid
Househ, Mowafa
Large-scale annotation dataset for fetal head biometry in ultrasound images
title Large-scale annotation dataset for fetal head biometry in ultrasound images
title_full Large-scale annotation dataset for fetal head biometry in ultrasound images
title_fullStr Large-scale annotation dataset for fetal head biometry in ultrasound images
title_full_unstemmed Large-scale annotation dataset for fetal head biometry in ultrasound images
title_short Large-scale annotation dataset for fetal head biometry in ultrasound images
title_sort large-scale annotation dataset for fetal head biometry in ultrasound images
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10630602/
https://www.ncbi.nlm.nih.gov/pubmed/38020431
http://dx.doi.org/10.1016/j.dib.2023.109708
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