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Collagen type XIV is proportionally lower in the lung tissue of patients with IPF

Abnormal deposition of extracellular matrix (ECM) in lung tissue is a characteristic of idiopathic pulmonary fibrosis (IPF). Increased collagen deposition is also accompanied by altered collagen organization. Collagen type XIV, a fibril-associated collagen, supports collagen fibril organization. Its...

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Autores principales: Nizamoglu, Mehmet, Koloko Ngassie, Maunick Lefin, Meuleman, Rhode A., Banchero, Martin, Borghuis, Theo, Timens, Wim, Nawijn, Martijn C., Melgert, Barbro N., Heijink, Irene H., Brandsma, Corry-Anke, Burgess, Janette K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10632429/
https://www.ncbi.nlm.nih.gov/pubmed/37938243
http://dx.doi.org/10.1038/s41598-023-46733-5
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author Nizamoglu, Mehmet
Koloko Ngassie, Maunick Lefin
Meuleman, Rhode A.
Banchero, Martin
Borghuis, Theo
Timens, Wim
Nawijn, Martijn C.
Melgert, Barbro N.
Heijink, Irene H.
Brandsma, Corry-Anke
Burgess, Janette K.
author_facet Nizamoglu, Mehmet
Koloko Ngassie, Maunick Lefin
Meuleman, Rhode A.
Banchero, Martin
Borghuis, Theo
Timens, Wim
Nawijn, Martijn C.
Melgert, Barbro N.
Heijink, Irene H.
Brandsma, Corry-Anke
Burgess, Janette K.
author_sort Nizamoglu, Mehmet
collection PubMed
description Abnormal deposition of extracellular matrix (ECM) in lung tissue is a characteristic of idiopathic pulmonary fibrosis (IPF). Increased collagen deposition is also accompanied by altered collagen organization. Collagen type XIV, a fibril-associated collagen, supports collagen fibril organization. Its status in IPF has not been described at the protein level yet. In this study, we utilized publicly available datasets for single-cell RNA-sequencing for characterizing collagen type XIV expression at the gene level. For protein level comparison, we applied immunohistochemical staining for collagen type XIV on lung tissue sections from IPF patients and compared it to lung tissue sections from never smoking and ex-smoking donors. Analyzing the relative amounts of collagen type XIV at the whole tissue level, as well as in parenchyma, airway wall and bronchial epithelium, we found consistently lower proportions of collagen type XIV in all lung tissue compartments across IPF samples. Our study suggests proportionally lower collagen type XIV in IPF lung tissues may have implications for the assembly of the ECM fibers potentially contributing to progression of fibrosis.
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spelling pubmed-106324292023-11-10 Collagen type XIV is proportionally lower in the lung tissue of patients with IPF Nizamoglu, Mehmet Koloko Ngassie, Maunick Lefin Meuleman, Rhode A. Banchero, Martin Borghuis, Theo Timens, Wim Nawijn, Martijn C. Melgert, Barbro N. Heijink, Irene H. Brandsma, Corry-Anke Burgess, Janette K. Sci Rep Article Abnormal deposition of extracellular matrix (ECM) in lung tissue is a characteristic of idiopathic pulmonary fibrosis (IPF). Increased collagen deposition is also accompanied by altered collagen organization. Collagen type XIV, a fibril-associated collagen, supports collagen fibril organization. Its status in IPF has not been described at the protein level yet. In this study, we utilized publicly available datasets for single-cell RNA-sequencing for characterizing collagen type XIV expression at the gene level. For protein level comparison, we applied immunohistochemical staining for collagen type XIV on lung tissue sections from IPF patients and compared it to lung tissue sections from never smoking and ex-smoking donors. Analyzing the relative amounts of collagen type XIV at the whole tissue level, as well as in parenchyma, airway wall and bronchial epithelium, we found consistently lower proportions of collagen type XIV in all lung tissue compartments across IPF samples. Our study suggests proportionally lower collagen type XIV in IPF lung tissues may have implications for the assembly of the ECM fibers potentially contributing to progression of fibrosis. Nature Publishing Group UK 2023-11-08 /pmc/articles/PMC10632429/ /pubmed/37938243 http://dx.doi.org/10.1038/s41598-023-46733-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Nizamoglu, Mehmet
Koloko Ngassie, Maunick Lefin
Meuleman, Rhode A.
Banchero, Martin
Borghuis, Theo
Timens, Wim
Nawijn, Martijn C.
Melgert, Barbro N.
Heijink, Irene H.
Brandsma, Corry-Anke
Burgess, Janette K.
Collagen type XIV is proportionally lower in the lung tissue of patients with IPF
title Collagen type XIV is proportionally lower in the lung tissue of patients with IPF
title_full Collagen type XIV is proportionally lower in the lung tissue of patients with IPF
title_fullStr Collagen type XIV is proportionally lower in the lung tissue of patients with IPF
title_full_unstemmed Collagen type XIV is proportionally lower in the lung tissue of patients with IPF
title_short Collagen type XIV is proportionally lower in the lung tissue of patients with IPF
title_sort collagen type xiv is proportionally lower in the lung tissue of patients with ipf
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10632429/
https://www.ncbi.nlm.nih.gov/pubmed/37938243
http://dx.doi.org/10.1038/s41598-023-46733-5
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