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Collagen type XIV is proportionally lower in the lung tissue of patients with IPF
Abnormal deposition of extracellular matrix (ECM) in lung tissue is a characteristic of idiopathic pulmonary fibrosis (IPF). Increased collagen deposition is also accompanied by altered collagen organization. Collagen type XIV, a fibril-associated collagen, supports collagen fibril organization. Its...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10632429/ https://www.ncbi.nlm.nih.gov/pubmed/37938243 http://dx.doi.org/10.1038/s41598-023-46733-5 |
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author | Nizamoglu, Mehmet Koloko Ngassie, Maunick Lefin Meuleman, Rhode A. Banchero, Martin Borghuis, Theo Timens, Wim Nawijn, Martijn C. Melgert, Barbro N. Heijink, Irene H. Brandsma, Corry-Anke Burgess, Janette K. |
author_facet | Nizamoglu, Mehmet Koloko Ngassie, Maunick Lefin Meuleman, Rhode A. Banchero, Martin Borghuis, Theo Timens, Wim Nawijn, Martijn C. Melgert, Barbro N. Heijink, Irene H. Brandsma, Corry-Anke Burgess, Janette K. |
author_sort | Nizamoglu, Mehmet |
collection | PubMed |
description | Abnormal deposition of extracellular matrix (ECM) in lung tissue is a characteristic of idiopathic pulmonary fibrosis (IPF). Increased collagen deposition is also accompanied by altered collagen organization. Collagen type XIV, a fibril-associated collagen, supports collagen fibril organization. Its status in IPF has not been described at the protein level yet. In this study, we utilized publicly available datasets for single-cell RNA-sequencing for characterizing collagen type XIV expression at the gene level. For protein level comparison, we applied immunohistochemical staining for collagen type XIV on lung tissue sections from IPF patients and compared it to lung tissue sections from never smoking and ex-smoking donors. Analyzing the relative amounts of collagen type XIV at the whole tissue level, as well as in parenchyma, airway wall and bronchial epithelium, we found consistently lower proportions of collagen type XIV in all lung tissue compartments across IPF samples. Our study suggests proportionally lower collagen type XIV in IPF lung tissues may have implications for the assembly of the ECM fibers potentially contributing to progression of fibrosis. |
format | Online Article Text |
id | pubmed-10632429 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106324292023-11-10 Collagen type XIV is proportionally lower in the lung tissue of patients with IPF Nizamoglu, Mehmet Koloko Ngassie, Maunick Lefin Meuleman, Rhode A. Banchero, Martin Borghuis, Theo Timens, Wim Nawijn, Martijn C. Melgert, Barbro N. Heijink, Irene H. Brandsma, Corry-Anke Burgess, Janette K. Sci Rep Article Abnormal deposition of extracellular matrix (ECM) in lung tissue is a characteristic of idiopathic pulmonary fibrosis (IPF). Increased collagen deposition is also accompanied by altered collagen organization. Collagen type XIV, a fibril-associated collagen, supports collagen fibril organization. Its status in IPF has not been described at the protein level yet. In this study, we utilized publicly available datasets for single-cell RNA-sequencing for characterizing collagen type XIV expression at the gene level. For protein level comparison, we applied immunohistochemical staining for collagen type XIV on lung tissue sections from IPF patients and compared it to lung tissue sections from never smoking and ex-smoking donors. Analyzing the relative amounts of collagen type XIV at the whole tissue level, as well as in parenchyma, airway wall and bronchial epithelium, we found consistently lower proportions of collagen type XIV in all lung tissue compartments across IPF samples. Our study suggests proportionally lower collagen type XIV in IPF lung tissues may have implications for the assembly of the ECM fibers potentially contributing to progression of fibrosis. Nature Publishing Group UK 2023-11-08 /pmc/articles/PMC10632429/ /pubmed/37938243 http://dx.doi.org/10.1038/s41598-023-46733-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Nizamoglu, Mehmet Koloko Ngassie, Maunick Lefin Meuleman, Rhode A. Banchero, Martin Borghuis, Theo Timens, Wim Nawijn, Martijn C. Melgert, Barbro N. Heijink, Irene H. Brandsma, Corry-Anke Burgess, Janette K. Collagen type XIV is proportionally lower in the lung tissue of patients with IPF |
title | Collagen type XIV is proportionally lower in the lung tissue of patients with IPF |
title_full | Collagen type XIV is proportionally lower in the lung tissue of patients with IPF |
title_fullStr | Collagen type XIV is proportionally lower in the lung tissue of patients with IPF |
title_full_unstemmed | Collagen type XIV is proportionally lower in the lung tissue of patients with IPF |
title_short | Collagen type XIV is proportionally lower in the lung tissue of patients with IPF |
title_sort | collagen type xiv is proportionally lower in the lung tissue of patients with ipf |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10632429/ https://www.ncbi.nlm.nih.gov/pubmed/37938243 http://dx.doi.org/10.1038/s41598-023-46733-5 |
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