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A brain MRI dataset and baseline evaluations for tumor recurrence prediction after Gamma Knife radiotherapy

Prediction and identification of tumor recurrence are critical for brain cancer treatment design and planning. Stereotactic radiation therapy delivered with Gamma Knife has been developed as one of the common treatment approaches combined with others by delivering radiation that targets accurately o...

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Autores principales: Wang, Yibin, Duggar, William Neil, Caballero, David Michael, Thomas, Toms Vengaloor, Adari, Neha, Mundra, Eswara Kumar, Wang, Haifeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10632458/
https://www.ncbi.nlm.nih.gov/pubmed/37938247
http://dx.doi.org/10.1038/s41597-023-02683-1
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author Wang, Yibin
Duggar, William Neil
Caballero, David Michael
Thomas, Toms Vengaloor
Adari, Neha
Mundra, Eswara Kumar
Wang, Haifeng
author_facet Wang, Yibin
Duggar, William Neil
Caballero, David Michael
Thomas, Toms Vengaloor
Adari, Neha
Mundra, Eswara Kumar
Wang, Haifeng
author_sort Wang, Yibin
collection PubMed
description Prediction and identification of tumor recurrence are critical for brain cancer treatment design and planning. Stereotactic radiation therapy delivered with Gamma Knife has been developed as one of the common treatment approaches combined with others by delivering radiation that targets accurately on the tumor while not affecting nearby healthy tissues. In this paper, we release a fully publicly available brain cancer MRI dataset and the companion Gamma Knife treatment planning and follow-up data for the purpose of tumor recurrence prediction. The dataset contains original patient MRI images, radiation therapy data, and clinical information. Lesion annotations are provided, and inclusive preprocessing steps have been specified to simplify the usage of this dataset. A baseline framework based on a convolutional neural network is proposed companionably with basic evaluations. The release of this dataset will contribute to the future development of automated brain tumor recurrence prediction algorithms and promote the clinical implementations associated with the computer vision field. The dataset is made publicly available on The Cancer Imaging Archive (TCIA) (10.7937/xb6d-py67).
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spelling pubmed-106324582023-11-10 A brain MRI dataset and baseline evaluations for tumor recurrence prediction after Gamma Knife radiotherapy Wang, Yibin Duggar, William Neil Caballero, David Michael Thomas, Toms Vengaloor Adari, Neha Mundra, Eswara Kumar Wang, Haifeng Sci Data Data Descriptor Prediction and identification of tumor recurrence are critical for brain cancer treatment design and planning. Stereotactic radiation therapy delivered with Gamma Knife has been developed as one of the common treatment approaches combined with others by delivering radiation that targets accurately on the tumor while not affecting nearby healthy tissues. In this paper, we release a fully publicly available brain cancer MRI dataset and the companion Gamma Knife treatment planning and follow-up data for the purpose of tumor recurrence prediction. The dataset contains original patient MRI images, radiation therapy data, and clinical information. Lesion annotations are provided, and inclusive preprocessing steps have been specified to simplify the usage of this dataset. A baseline framework based on a convolutional neural network is proposed companionably with basic evaluations. The release of this dataset will contribute to the future development of automated brain tumor recurrence prediction algorithms and promote the clinical implementations associated with the computer vision field. The dataset is made publicly available on The Cancer Imaging Archive (TCIA) (10.7937/xb6d-py67). Nature Publishing Group UK 2023-11-08 /pmc/articles/PMC10632458/ /pubmed/37938247 http://dx.doi.org/10.1038/s41597-023-02683-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Wang, Yibin
Duggar, William Neil
Caballero, David Michael
Thomas, Toms Vengaloor
Adari, Neha
Mundra, Eswara Kumar
Wang, Haifeng
A brain MRI dataset and baseline evaluations for tumor recurrence prediction after Gamma Knife radiotherapy
title A brain MRI dataset and baseline evaluations for tumor recurrence prediction after Gamma Knife radiotherapy
title_full A brain MRI dataset and baseline evaluations for tumor recurrence prediction after Gamma Knife radiotherapy
title_fullStr A brain MRI dataset and baseline evaluations for tumor recurrence prediction after Gamma Knife radiotherapy
title_full_unstemmed A brain MRI dataset and baseline evaluations for tumor recurrence prediction after Gamma Knife radiotherapy
title_short A brain MRI dataset and baseline evaluations for tumor recurrence prediction after Gamma Knife radiotherapy
title_sort brain mri dataset and baseline evaluations for tumor recurrence prediction after gamma knife radiotherapy
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10632458/
https://www.ncbi.nlm.nih.gov/pubmed/37938247
http://dx.doi.org/10.1038/s41597-023-02683-1
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