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Network size affects the complexity of activity in human iPSC-derived neuronal populations

Multi-electrode recording of neural activity in cultures offer opportunities for understanding how the structure of a network gives rise to function. Although it is hypothesized that network size is critical for determining the dynamics of activity, this relationship in human neural cultures remains...

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Autores principales: Uzun, Yavuz Selim, Santos, Renata, Marchetto, Maria C., Padmanabhan, Krishnan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635014/
https://www.ncbi.nlm.nih.gov/pubmed/37961249
http://dx.doi.org/10.1101/2023.10.31.564939
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author Uzun, Yavuz Selim
Santos, Renata
Marchetto, Maria C.
Padmanabhan, Krishnan
author_facet Uzun, Yavuz Selim
Santos, Renata
Marchetto, Maria C.
Padmanabhan, Krishnan
author_sort Uzun, Yavuz Selim
collection PubMed
description Multi-electrode recording of neural activity in cultures offer opportunities for understanding how the structure of a network gives rise to function. Although it is hypothesized that network size is critical for determining the dynamics of activity, this relationship in human neural cultures remains largely unexplored. By applying new methods for analyzing neural activity to human iPSC derived cultures at either low-densities or high-densities, we uncovered the significant impacts that neuron number has on the individual neurophysiological properties of cells (such as firing rates), the collective behavior of the networks these cultures formed (as measured by entropy), and the relationship between the two. As a result, simply changing the densities of neurons generated dynamics and network behavior that differed not just in degree, but in kind. Beyond revealing the relationship between network structure and function, our findings provide a novel analytical framework to study diseases where network level activity is affected.
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spelling pubmed-106350142023-11-13 Network size affects the complexity of activity in human iPSC-derived neuronal populations Uzun, Yavuz Selim Santos, Renata Marchetto, Maria C. Padmanabhan, Krishnan bioRxiv Article Multi-electrode recording of neural activity in cultures offer opportunities for understanding how the structure of a network gives rise to function. Although it is hypothesized that network size is critical for determining the dynamics of activity, this relationship in human neural cultures remains largely unexplored. By applying new methods for analyzing neural activity to human iPSC derived cultures at either low-densities or high-densities, we uncovered the significant impacts that neuron number has on the individual neurophysiological properties of cells (such as firing rates), the collective behavior of the networks these cultures formed (as measured by entropy), and the relationship between the two. As a result, simply changing the densities of neurons generated dynamics and network behavior that differed not just in degree, but in kind. Beyond revealing the relationship between network structure and function, our findings provide a novel analytical framework to study diseases where network level activity is affected. Cold Spring Harbor Laboratory 2023-11-02 /pmc/articles/PMC10635014/ /pubmed/37961249 http://dx.doi.org/10.1101/2023.10.31.564939 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Uzun, Yavuz Selim
Santos, Renata
Marchetto, Maria C.
Padmanabhan, Krishnan
Network size affects the complexity of activity in human iPSC-derived neuronal populations
title Network size affects the complexity of activity in human iPSC-derived neuronal populations
title_full Network size affects the complexity of activity in human iPSC-derived neuronal populations
title_fullStr Network size affects the complexity of activity in human iPSC-derived neuronal populations
title_full_unstemmed Network size affects the complexity of activity in human iPSC-derived neuronal populations
title_short Network size affects the complexity of activity in human iPSC-derived neuronal populations
title_sort network size affects the complexity of activity in human ipsc-derived neuronal populations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635014/
https://www.ncbi.nlm.nih.gov/pubmed/37961249
http://dx.doi.org/10.1101/2023.10.31.564939
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