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Automated single-cell omics end-to-end framework with data-driven batch inference

To facilitate single cell multi-omics analysis and improve reproducibility, we present SPEEDI (Single-cell Pipeline for End to End Data Integration), a fully automated end-to-end framework for batch inference, data integration, and cell type labeling. SPEEDI introduces data-driven batch inference an...

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Detalles Bibliográficos
Autores principales:	Wang, Yuan, Thistlethwaite, William, Tadych, Alicja, Ruf-Zamojski, Frederique, Bernard, Daniel J, Cappuccio, Antonio, Zaslavsky, Elena, Chen, Xi, Sealfon, Stuart C., Troyanskaya, Olga G.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635042/ https://www.ncbi.nlm.nih.gov/pubmed/37961197 http://dx.doi.org/10.1101/2023.11.01.564815

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