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Movi: a fast and cache-efficient full-text pangenome index
Efficient pangenome indexes are promising tools for many applications, including rapid classification of nanopore sequencing reads. Recently, a compressed-index data structure called the “move structure” was proposed as an alternative to other BWT-based indexes like the FM index and r-index. The mov...
Autores principales: | Zakeri, Mohsen, Brown, Nathaniel K., Ahmed, Omar Y., Gagie, Travis, Langmead, Ben |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635132/ https://www.ncbi.nlm.nih.gov/pubmed/37961660 http://dx.doi.org/10.1101/2023.11.04.565615 |
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