Cargando…

Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development

The incorporation of histone variants, distinct paralogs of core histones, into chromatin affects all DNA-templated processes in the cell, including the regulation of transcription. In recent years, much research has been focused on H2A.Z, an evolutionarily conserved H2A variant found in all eukaryo...

Descripción completa

Detalles Bibliográficos
Autores principales: Sijacic, Paja, Holder, Dylan H., Willett, Courtney G., Foroozani, Maryam, Deal, Roger B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635141/
https://www.ncbi.nlm.nih.gov/pubmed/37961174
http://dx.doi.org/10.1101/2023.11.03.565555
_version_ 1785146295225155584
author Sijacic, Paja
Holder, Dylan H.
Willett, Courtney G.
Foroozani, Maryam
Deal, Roger B.
author_facet Sijacic, Paja
Holder, Dylan H.
Willett, Courtney G.
Foroozani, Maryam
Deal, Roger B.
author_sort Sijacic, Paja
collection PubMed
description The incorporation of histone variants, distinct paralogs of core histones, into chromatin affects all DNA-templated processes in the cell, including the regulation of transcription. In recent years, much research has been focused on H2A.Z, an evolutionarily conserved H2A variant found in all eukaryotes. In order to investigate the functional conservation of H2A.Z histones during eukaryotic evolution we transformed h2a.z deficient plants with three human H2A.Z proteins to assess their ability to rescue the mutant defects. We discovered that human H2A.Z.1 and H2A.Z.2.1 fully complement the phenotypic abnormalities of h2a.z plants despite the fact that Arabidopsis and human H2A.Z N-terminal tail sequences are quite divergent. In contrast, the brain-specific splice variant H2A.Z.2.2 has a dominant-negative effect in wild-type plants. Furthermore, H2A.Z.1 almost completely re-establishes normal H2A.Z chromatin occupancy in h2a.z plants and restores the transcript levels of more than 84 % of misexpressed genes. Finally, our hypothesis that the N-terminal tail of Arabidopsis H2A.Z is not crucial for its developmental functions was supported by the ability of N-terminal end truncations of Arabidopsis HTA11 to largely rescue the defects of h2a.z mutants.
format Online
Article
Text
id pubmed-10635141
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Cold Spring Harbor Laboratory
record_format MEDLINE/PubMed
spelling pubmed-106351412023-11-13 Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development Sijacic, Paja Holder, Dylan H. Willett, Courtney G. Foroozani, Maryam Deal, Roger B. bioRxiv Article The incorporation of histone variants, distinct paralogs of core histones, into chromatin affects all DNA-templated processes in the cell, including the regulation of transcription. In recent years, much research has been focused on H2A.Z, an evolutionarily conserved H2A variant found in all eukaryotes. In order to investigate the functional conservation of H2A.Z histones during eukaryotic evolution we transformed h2a.z deficient plants with three human H2A.Z proteins to assess their ability to rescue the mutant defects. We discovered that human H2A.Z.1 and H2A.Z.2.1 fully complement the phenotypic abnormalities of h2a.z plants despite the fact that Arabidopsis and human H2A.Z N-terminal tail sequences are quite divergent. In contrast, the brain-specific splice variant H2A.Z.2.2 has a dominant-negative effect in wild-type plants. Furthermore, H2A.Z.1 almost completely re-establishes normal H2A.Z chromatin occupancy in h2a.z plants and restores the transcript levels of more than 84 % of misexpressed genes. Finally, our hypothesis that the N-terminal tail of Arabidopsis H2A.Z is not crucial for its developmental functions was supported by the ability of N-terminal end truncations of Arabidopsis HTA11 to largely rescue the defects of h2a.z mutants. Cold Spring Harbor Laboratory 2023-11-05 /pmc/articles/PMC10635141/ /pubmed/37961174 http://dx.doi.org/10.1101/2023.11.03.565555 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Sijacic, Paja
Holder, Dylan H.
Willett, Courtney G.
Foroozani, Maryam
Deal, Roger B.
Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development
title Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development
title_full Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development
title_fullStr Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development
title_full_unstemmed Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development
title_short Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development
title_sort replacement of arabidopsis h2a.z with human h2a.z orthologs reveals extensive functional conservation and limited importance of the n-terminal tail sequence for arabidopsis development
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635141/
https://www.ncbi.nlm.nih.gov/pubmed/37961174
http://dx.doi.org/10.1101/2023.11.03.565555
work_keys_str_mv AT sijacicpaja replacementofarabidopsish2azwithhumanh2azorthologsrevealsextensivefunctionalconservationandlimitedimportanceofthenterminaltailsequenceforarabidopsisdevelopment
AT holderdylanh replacementofarabidopsish2azwithhumanh2azorthologsrevealsextensivefunctionalconservationandlimitedimportanceofthenterminaltailsequenceforarabidopsisdevelopment
AT willettcourtneyg replacementofarabidopsish2azwithhumanh2azorthologsrevealsextensivefunctionalconservationandlimitedimportanceofthenterminaltailsequenceforarabidopsisdevelopment
AT foroozanimaryam replacementofarabidopsish2azwithhumanh2azorthologsrevealsextensivefunctionalconservationandlimitedimportanceofthenterminaltailsequenceforarabidopsisdevelopment
AT dealrogerb replacementofarabidopsish2azwithhumanh2azorthologsrevealsextensivefunctionalconservationandlimitedimportanceofthenterminaltailsequenceforarabidopsisdevelopment