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Characterization of highly active mutational signatures in tumors from a large Chinese population
The majority of mutational signatures have been characterized in tumors from Western countries and the degree to which mutational signatures are similar or different in Eastern populations has not been fully explored. We leveraged a large-scale clinical sequencing cohort of tumors from a Chinese pop...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635259/ https://www.ncbi.nlm.nih.gov/pubmed/37961450 http://dx.doi.org/10.1101/2023.11.03.23297964 |
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author | Chevalier, Aaron Guo, Tao Gurevich, Natasha Q. Xu, Jingwen Yajima, Masanao Campbell, Joshua D. |
author_facet | Chevalier, Aaron Guo, Tao Gurevich, Natasha Q. Xu, Jingwen Yajima, Masanao Campbell, Joshua D. |
author_sort | Chevalier, Aaron |
collection | PubMed |
description | The majority of mutational signatures have been characterized in tumors from Western countries and the degree to which mutational signatures are similar or different in Eastern populations has not been fully explored. We leveraged a large-scale clinical sequencing cohort of tumors from a Chinese population containing 25 tumor types and found that the highly active mutational signatures were similar to those previously characterized(1,2). The aristolochic acid signature SBS22 was observed in four soft tissue sarcomas and the POLE-associated signature SBS10 was observed in a gallbladder carcinoma. In lung adenocarcinoma, the polycyclic aromatic hydrocarbon (PAH) signature SBS4 was significantly higher in males compared to females but not associated with smoking status. The UV-associated signature SBS7 was significantly lower in cutaneous melanomas from the Chinese population compared to a similar American cohort. Overall, these results add to our understanding of the mutational processes that contribute to tumors from the Chinese population. |
format | Online Article Text |
id | pubmed-10635259 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-106352592023-11-13 Characterization of highly active mutational signatures in tumors from a large Chinese population Chevalier, Aaron Guo, Tao Gurevich, Natasha Q. Xu, Jingwen Yajima, Masanao Campbell, Joshua D. medRxiv Article The majority of mutational signatures have been characterized in tumors from Western countries and the degree to which mutational signatures are similar or different in Eastern populations has not been fully explored. We leveraged a large-scale clinical sequencing cohort of tumors from a Chinese population containing 25 tumor types and found that the highly active mutational signatures were similar to those previously characterized(1,2). The aristolochic acid signature SBS22 was observed in four soft tissue sarcomas and the POLE-associated signature SBS10 was observed in a gallbladder carcinoma. In lung adenocarcinoma, the polycyclic aromatic hydrocarbon (PAH) signature SBS4 was significantly higher in males compared to females but not associated with smoking status. The UV-associated signature SBS7 was significantly lower in cutaneous melanomas from the Chinese population compared to a similar American cohort. Overall, these results add to our understanding of the mutational processes that contribute to tumors from the Chinese population. Cold Spring Harbor Laboratory 2023-11-04 /pmc/articles/PMC10635259/ /pubmed/37961450 http://dx.doi.org/10.1101/2023.11.03.23297964 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Chevalier, Aaron Guo, Tao Gurevich, Natasha Q. Xu, Jingwen Yajima, Masanao Campbell, Joshua D. Characterization of highly active mutational signatures in tumors from a large Chinese population |
title | Characterization of highly active mutational signatures in tumors from a large Chinese population |
title_full | Characterization of highly active mutational signatures in tumors from a large Chinese population |
title_fullStr | Characterization of highly active mutational signatures in tumors from a large Chinese population |
title_full_unstemmed | Characterization of highly active mutational signatures in tumors from a large Chinese population |
title_short | Characterization of highly active mutational signatures in tumors from a large Chinese population |
title_sort | characterization of highly active mutational signatures in tumors from a large chinese population |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635259/ https://www.ncbi.nlm.nih.gov/pubmed/37961450 http://dx.doi.org/10.1101/2023.11.03.23297964 |
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