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Characterization of highly active mutational signatures in tumors from a large Chinese population

The majority of mutational signatures have been characterized in tumors from Western countries and the degree to which mutational signatures are similar or different in Eastern populations has not been fully explored. We leveraged a large-scale clinical sequencing cohort of tumors from a Chinese pop...

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Autores principales: Chevalier, Aaron, Guo, Tao, Gurevich, Natasha Q., Xu, Jingwen, Yajima, Masanao, Campbell, Joshua D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635259/
https://www.ncbi.nlm.nih.gov/pubmed/37961450
http://dx.doi.org/10.1101/2023.11.03.23297964
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author Chevalier, Aaron
Guo, Tao
Gurevich, Natasha Q.
Xu, Jingwen
Yajima, Masanao
Campbell, Joshua D.
author_facet Chevalier, Aaron
Guo, Tao
Gurevich, Natasha Q.
Xu, Jingwen
Yajima, Masanao
Campbell, Joshua D.
author_sort Chevalier, Aaron
collection PubMed
description The majority of mutational signatures have been characterized in tumors from Western countries and the degree to which mutational signatures are similar or different in Eastern populations has not been fully explored. We leveraged a large-scale clinical sequencing cohort of tumors from a Chinese population containing 25 tumor types and found that the highly active mutational signatures were similar to those previously characterized(1,2). The aristolochic acid signature SBS22 was observed in four soft tissue sarcomas and the POLE-associated signature SBS10 was observed in a gallbladder carcinoma. In lung adenocarcinoma, the polycyclic aromatic hydrocarbon (PAH) signature SBS4 was significantly higher in males compared to females but not associated with smoking status. The UV-associated signature SBS7 was significantly lower in cutaneous melanomas from the Chinese population compared to a similar American cohort. Overall, these results add to our understanding of the mutational processes that contribute to tumors from the Chinese population.
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spelling pubmed-106352592023-11-13 Characterization of highly active mutational signatures in tumors from a large Chinese population Chevalier, Aaron Guo, Tao Gurevich, Natasha Q. Xu, Jingwen Yajima, Masanao Campbell, Joshua D. medRxiv Article The majority of mutational signatures have been characterized in tumors from Western countries and the degree to which mutational signatures are similar or different in Eastern populations has not been fully explored. We leveraged a large-scale clinical sequencing cohort of tumors from a Chinese population containing 25 tumor types and found that the highly active mutational signatures were similar to those previously characterized(1,2). The aristolochic acid signature SBS22 was observed in four soft tissue sarcomas and the POLE-associated signature SBS10 was observed in a gallbladder carcinoma. In lung adenocarcinoma, the polycyclic aromatic hydrocarbon (PAH) signature SBS4 was significantly higher in males compared to females but not associated with smoking status. The UV-associated signature SBS7 was significantly lower in cutaneous melanomas from the Chinese population compared to a similar American cohort. Overall, these results add to our understanding of the mutational processes that contribute to tumors from the Chinese population. Cold Spring Harbor Laboratory 2023-11-04 /pmc/articles/PMC10635259/ /pubmed/37961450 http://dx.doi.org/10.1101/2023.11.03.23297964 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Chevalier, Aaron
Guo, Tao
Gurevich, Natasha Q.
Xu, Jingwen
Yajima, Masanao
Campbell, Joshua D.
Characterization of highly active mutational signatures in tumors from a large Chinese population
title Characterization of highly active mutational signatures in tumors from a large Chinese population
title_full Characterization of highly active mutational signatures in tumors from a large Chinese population
title_fullStr Characterization of highly active mutational signatures in tumors from a large Chinese population
title_full_unstemmed Characterization of highly active mutational signatures in tumors from a large Chinese population
title_short Characterization of highly active mutational signatures in tumors from a large Chinese population
title_sort characterization of highly active mutational signatures in tumors from a large chinese population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635259/
https://www.ncbi.nlm.nih.gov/pubmed/37961450
http://dx.doi.org/10.1101/2023.11.03.23297964
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