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Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China

INTRODUCTION: Soil microorganisms are an important component of soil ecosystems with an indispensable role in forest ecosystems. We analyzed the soil microbial diversity in birch secondary forest formed by natural restoration or artificial reconstruction after interference by burning, clear cutting,...

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Autores principales: Zhai, Kaitao, Hua, Yongchun, Liang, Jingwen, Li, Jing, Wang, Zirui, Liu, Lei, Gao, Minglong, Sa, Rula, Zhao, Mingmin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635414/
https://www.ncbi.nlm.nih.gov/pubmed/37954244
http://dx.doi.org/10.3389/fmicb.2023.1267746
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author Zhai, Kaitao
Hua, Yongchun
Liang, Jingwen
Li, Jing
Wang, Zirui
Liu, Lei
Gao, Minglong
Sa, Rula
Zhao, Mingmin
author_facet Zhai, Kaitao
Hua, Yongchun
Liang, Jingwen
Li, Jing
Wang, Zirui
Liu, Lei
Gao, Minglong
Sa, Rula
Zhao, Mingmin
author_sort Zhai, Kaitao
collection PubMed
description INTRODUCTION: Soil microorganisms are an important component of soil ecosystems with an indispensable role in forest ecosystems. We analyzed the soil microbial diversity in birch secondary forest formed by natural restoration or artificial reconstruction after interference by burning, clear cutting, and gradient cutting, and the Betula platyphylla Suk undisturbed forest in the Greater Khingan Mountains in China. METHODS: Illumina high-throughput sequencing technology was used to analyze the characteristics of the soil microbial community during the restoration process of birch secondary forest caused by the different types of interference. The relationships between bacteria and fungi were analyzed. The gene functions of the soil bacterial community and the ecological functions of soil fungi were predicted using PICRUSt and FunGuild, respectively. RESULTS: At the phylum level, the species and quantity of bacteria were more abundant than that of fungi. At the genus level, no obvious differences in the abundance of bacteria were observed; there were obvious differences in the abundance of fungi. Among the eight sample plots, the artificial larch forest belt had the highest bacterial and fungal alpha diversity, which was slightly higher than undisturbed forest, while the other sample plots were significantly lower. Gradual cutting pure birch forest bacteria and fungi had the highest beta diversity, and artificial larch forest belt bacteria and heavy burn sample plot fungi had the lowest beta diversity. Samples from the cutting and burning sample plots were significantly different from the undisturbed forest at the phylum level of Acidobacteriae, Acidimicrobiia, Mortierellomycetes and Sordariomycetes. We found statistical differences in biomarkers between bacterial and fungal communities in undisturbed forest and artificial larch forest belt and burn sample plots. PICRUSt prediction and FunGuild prediction showed that soil bacterial and fungal communities were rich in gene and ecological functions, respectively. In the microbial network, the stability or anti-interference performance of the fungal community was higher than that of bacteria. CONCLUSION: Our data reveal the characteristics of the soil microbial community during the restoration process of Betula platyphylla Suk secondary forest under different types of disturbance, which is of great significance for understanding the role of soil microorganisms in the forest ecological cycle.
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spelling pubmed-106354142023-11-10 Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China Zhai, Kaitao Hua, Yongchun Liang, Jingwen Li, Jing Wang, Zirui Liu, Lei Gao, Minglong Sa, Rula Zhao, Mingmin Front Microbiol Microbiology INTRODUCTION: Soil microorganisms are an important component of soil ecosystems with an indispensable role in forest ecosystems. We analyzed the soil microbial diversity in birch secondary forest formed by natural restoration or artificial reconstruction after interference by burning, clear cutting, and gradient cutting, and the Betula platyphylla Suk undisturbed forest in the Greater Khingan Mountains in China. METHODS: Illumina high-throughput sequencing technology was used to analyze the characteristics of the soil microbial community during the restoration process of birch secondary forest caused by the different types of interference. The relationships between bacteria and fungi were analyzed. The gene functions of the soil bacterial community and the ecological functions of soil fungi were predicted using PICRUSt and FunGuild, respectively. RESULTS: At the phylum level, the species and quantity of bacteria were more abundant than that of fungi. At the genus level, no obvious differences in the abundance of bacteria were observed; there were obvious differences in the abundance of fungi. Among the eight sample plots, the artificial larch forest belt had the highest bacterial and fungal alpha diversity, which was slightly higher than undisturbed forest, while the other sample plots were significantly lower. Gradual cutting pure birch forest bacteria and fungi had the highest beta diversity, and artificial larch forest belt bacteria and heavy burn sample plot fungi had the lowest beta diversity. Samples from the cutting and burning sample plots were significantly different from the undisturbed forest at the phylum level of Acidobacteriae, Acidimicrobiia, Mortierellomycetes and Sordariomycetes. We found statistical differences in biomarkers between bacterial and fungal communities in undisturbed forest and artificial larch forest belt and burn sample plots. PICRUSt prediction and FunGuild prediction showed that soil bacterial and fungal communities were rich in gene and ecological functions, respectively. In the microbial network, the stability or anti-interference performance of the fungal community was higher than that of bacteria. CONCLUSION: Our data reveal the characteristics of the soil microbial community during the restoration process of Betula platyphylla Suk secondary forest under different types of disturbance, which is of great significance for understanding the role of soil microorganisms in the forest ecological cycle. Frontiers Media S.A. 2023-10-23 /pmc/articles/PMC10635414/ /pubmed/37954244 http://dx.doi.org/10.3389/fmicb.2023.1267746 Text en Copyright © 2023 Zhai, Hua, Liang, Li, Wang, Liu, Gao, Sa and Zhao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Zhai, Kaitao
Hua, Yongchun
Liang, Jingwen
Li, Jing
Wang, Zirui
Liu, Lei
Gao, Minglong
Sa, Rula
Zhao, Mingmin
Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China
title Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China
title_full Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China
title_fullStr Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China
title_full_unstemmed Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China
title_short Soil microbial diversity under different types of interference in birch secondary forest in the Greater Khingan Mountains in China
title_sort soil microbial diversity under different types of interference in birch secondary forest in the greater khingan mountains in china
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10635414/
https://www.ncbi.nlm.nih.gov/pubmed/37954244
http://dx.doi.org/10.3389/fmicb.2023.1267746
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