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Comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer

Integrin αvβ3/α6β1 are crucial in the transduction of intercellular cancer information, while their roles in prostate cancer (PCa) remain poorly understood. Here, we systematically analyzed the transcriptome, single nucleotide polymorphisms (SNPs) and clinical data of 495 PCa patients from the TCGA...

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Autores principales: Liu, Yang, He, Jia-Xin, Ji, Bo, Wang, Jin-Feng, Zhang, Lu, Pang, Zhong-Qi, Wang, Jian-She, Ding, Bei-Chen, Ren, Ming-Hua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10637796/
https://www.ncbi.nlm.nih.gov/pubmed/37862114
http://dx.doi.org/10.18632/aging.205131
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author Liu, Yang
He, Jia-Xin
Ji, Bo
Wang, Jin-Feng
Zhang, Lu
Pang, Zhong-Qi
Wang, Jian-She
Ding, Bei-Chen
Ren, Ming-Hua
author_facet Liu, Yang
He, Jia-Xin
Ji, Bo
Wang, Jin-Feng
Zhang, Lu
Pang, Zhong-Qi
Wang, Jian-She
Ding, Bei-Chen
Ren, Ming-Hua
author_sort Liu, Yang
collection PubMed
description Integrin αvβ3/α6β1 are crucial in the transduction of intercellular cancer information, while their roles in prostate cancer (PCa) remain poorly understood. Here, we systematically analyzed the transcriptome, single nucleotide polymorphisms (SNPs) and clinical data of 495 PCa patients from the TCGA database and verified them in 220 GEO patients, and qPCR was used to validate the expression of the model genes in our patients. First, we found that integrin αvβ3/α6β1 was negatively correlated with most immune cell infiltration and immune functions and closely associated with poor survival in TCGA patients. Then, we divided these patients into two groups according to the expression level of αvβ3/α6β1, intersected differentially expressed genes of the two groups with the GEO dataset and identified eight biochemical recurrence-related genes (BRGs), and these genes were verified by qPCR in our patients. Next, these BRGs were used to construct a prognostic risk model by applying LASSO Cox regression. We found that the high-risk (HR) group showed poorer OS, PFS, biochemical recurrence and clinical characteristics than the low-risk (LR) group. In addition, the HR group was mainly enriched in the cell cycle pathway and had a higher TP53 mutation rate than the LR group. More importantly, lower immune cell infiltration and immune function, higher expression of PD-L1, PD-1, and CTLA4, and higher immune exclusion scores were identified in the HR group, suggesting a higher possibility of immune escape. These findings suggested the key role of integrin αvβ3/α6β1 in predicting prognosis, TP53 mutation and immune escape in PCa.
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spelling pubmed-106377962023-11-15 Comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer Liu, Yang He, Jia-Xin Ji, Bo Wang, Jin-Feng Zhang, Lu Pang, Zhong-Qi Wang, Jian-She Ding, Bei-Chen Ren, Ming-Hua Aging (Albany NY) Research Paper Integrin αvβ3/α6β1 are crucial in the transduction of intercellular cancer information, while their roles in prostate cancer (PCa) remain poorly understood. Here, we systematically analyzed the transcriptome, single nucleotide polymorphisms (SNPs) and clinical data of 495 PCa patients from the TCGA database and verified them in 220 GEO patients, and qPCR was used to validate the expression of the model genes in our patients. First, we found that integrin αvβ3/α6β1 was negatively correlated with most immune cell infiltration and immune functions and closely associated with poor survival in TCGA patients. Then, we divided these patients into two groups according to the expression level of αvβ3/α6β1, intersected differentially expressed genes of the two groups with the GEO dataset and identified eight biochemical recurrence-related genes (BRGs), and these genes were verified by qPCR in our patients. Next, these BRGs were used to construct a prognostic risk model by applying LASSO Cox regression. We found that the high-risk (HR) group showed poorer OS, PFS, biochemical recurrence and clinical characteristics than the low-risk (LR) group. In addition, the HR group was mainly enriched in the cell cycle pathway and had a higher TP53 mutation rate than the LR group. More importantly, lower immune cell infiltration and immune function, higher expression of PD-L1, PD-1, and CTLA4, and higher immune exclusion scores were identified in the HR group, suggesting a higher possibility of immune escape. These findings suggested the key role of integrin αvβ3/α6β1 in predicting prognosis, TP53 mutation and immune escape in PCa. Impact Journals 2023-10-19 /pmc/articles/PMC10637796/ /pubmed/37862114 http://dx.doi.org/10.18632/aging.205131 Text en Copyright: © 2023 Liu et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Liu, Yang
He, Jia-Xin
Ji, Bo
Wang, Jin-Feng
Zhang, Lu
Pang, Zhong-Qi
Wang, Jian-She
Ding, Bei-Chen
Ren, Ming-Hua
Comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer
title Comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer
title_full Comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer
title_fullStr Comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer
title_full_unstemmed Comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer
title_short Comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer
title_sort comprehensive analysis of integrin αvβ3/α6β1 in prognosis and immune escape of prostate cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10637796/
https://www.ncbi.nlm.nih.gov/pubmed/37862114
http://dx.doi.org/10.18632/aging.205131
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