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Superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis
Superoxide dismutase (SOD) is a crucial metal-containing enzyme that plays a vital role in catalyzing the dismutation of superoxide anions, converting them into molecular oxygen and hydrogen peroxide, essential for enhancing plant stress tolerance. We identified 8 SOD genes (4 CSODs, 2 FSODs, and 2...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10638475/ https://www.ncbi.nlm.nih.gov/pubmed/37954140 http://dx.doi.org/10.1016/j.isci.2023.107801 |
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author | Zheng, Linling Assane Hamidou, Abdoulaye Zhao, Xuerui Ouyang, Zhiwei Lin, Hongxin Li, Junyi Zhang, Xiaofei Luo, Kai Chen, Yinhua |
author_facet | Zheng, Linling Assane Hamidou, Abdoulaye Zhao, Xuerui Ouyang, Zhiwei Lin, Hongxin Li, Junyi Zhang, Xiaofei Luo, Kai Chen, Yinhua |
author_sort | Zheng, Linling |
collection | PubMed |
description | Superoxide dismutase (SOD) is a crucial metal-containing enzyme that plays a vital role in catalyzing the dismutation of superoxide anions, converting them into molecular oxygen and hydrogen peroxide, essential for enhancing plant stress tolerance. We identified 8 SOD genes (4 CSODs, 2 FSODs, and 2 MSODs) in cassava. Bioinformatics analyses provided insights into chromosomal location, phylogenetic relationships, gene structure, conserved motifs, and gene ontology annotations. MeSOD genes were classified into two groups through phylogenetic analysis, revealing evolutionary connections. Promoters of these genes harbored stress-related cis-elements. Duplication analysis indicated the functional significance of MeCSOD2/MeCSOD4 and MeMSOD1/MeMSOD2. Through qRT-PCR, MeCSOD2 responded to salt stress, MeMSOD2 to drought, and cassava bacterial blight. Silencing MeMSOD2 increased XpmCHN11 virulence, indicating MeMSOD2 is essential for cassava’s defense against XpmCHN11 infection. These findings enhance our understanding of the SOD gene family’s role in cassava and contribute to strategies for stress tolerance improvement. |
format | Online Article Text |
id | pubmed-10638475 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-106384752023-11-11 Superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis Zheng, Linling Assane Hamidou, Abdoulaye Zhao, Xuerui Ouyang, Zhiwei Lin, Hongxin Li, Junyi Zhang, Xiaofei Luo, Kai Chen, Yinhua iScience Article Superoxide dismutase (SOD) is a crucial metal-containing enzyme that plays a vital role in catalyzing the dismutation of superoxide anions, converting them into molecular oxygen and hydrogen peroxide, essential for enhancing plant stress tolerance. We identified 8 SOD genes (4 CSODs, 2 FSODs, and 2 MSODs) in cassava. Bioinformatics analyses provided insights into chromosomal location, phylogenetic relationships, gene structure, conserved motifs, and gene ontology annotations. MeSOD genes were classified into two groups through phylogenetic analysis, revealing evolutionary connections. Promoters of these genes harbored stress-related cis-elements. Duplication analysis indicated the functional significance of MeCSOD2/MeCSOD4 and MeMSOD1/MeMSOD2. Through qRT-PCR, MeCSOD2 responded to salt stress, MeMSOD2 to drought, and cassava bacterial blight. Silencing MeMSOD2 increased XpmCHN11 virulence, indicating MeMSOD2 is essential for cassava’s defense against XpmCHN11 infection. These findings enhance our understanding of the SOD gene family’s role in cassava and contribute to strategies for stress tolerance improvement. Elsevier 2023-09-27 /pmc/articles/PMC10638475/ /pubmed/37954140 http://dx.doi.org/10.1016/j.isci.2023.107801 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Zheng, Linling Assane Hamidou, Abdoulaye Zhao, Xuerui Ouyang, Zhiwei Lin, Hongxin Li, Junyi Zhang, Xiaofei Luo, Kai Chen, Yinhua Superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis |
title | Superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis |
title_full | Superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis |
title_fullStr | Superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis |
title_full_unstemmed | Superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis |
title_short | Superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis |
title_sort | superoxide dismutase gene family in cassava revealed their involvement in environmental stress via genome-wide analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10638475/ https://www.ncbi.nlm.nih.gov/pubmed/37954140 http://dx.doi.org/10.1016/j.isci.2023.107801 |
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