Cargando…
Characteristics of lactate metabolism phenotype in hepatocellular carcinoma
Hepatocellular carcinoma (HCC) is a highly heterogeneous cancer, and more effective prognostic markers are needed. Lactic acid has been proved to be an important metabolite involved in cancer development, metastasis, and the tumor microenvironment, affecting the prognosis of patients. The role of la...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10640573/ https://www.ncbi.nlm.nih.gov/pubmed/37952028 http://dx.doi.org/10.1038/s41598-023-47065-0 |
_version_ | 1785133785114738688 |
---|---|
author | Zhang, Jiacheng Dong, Keshuai Zhang, Xin Li, Chunlei Yu, Jia Wang, Weixing |
author_facet | Zhang, Jiacheng Dong, Keshuai Zhang, Xin Li, Chunlei Yu, Jia Wang, Weixing |
author_sort | Zhang, Jiacheng |
collection | PubMed |
description | Hepatocellular carcinoma (HCC) is a highly heterogeneous cancer, and more effective prognostic markers are needed. Lactic acid has been proved to be an important metabolite involved in cancer development, metastasis, and the tumor microenvironment, affecting the prognosis of patients. The role of lactic acid metabolism regulators (LAMRs) in HCC is still unclear. In this study, we analyzed the status of LAMRs, a gene list containing lactate from Molecular Signatures database, in HCC and consensus clustering was performed based on these LAMRs. Cluster B showed higher infiltrations of immune cells, higher TME scores, and a poorer prognosis. We further constructed a risk score based on DEGs using LASSO and COX regression analysis between two clusters, which could effectively predict the prognosis of TCGA-LIHC patients. The GSE14520 cohort confirmed the result. We also examined the correlation of risk scores with clinical characteristics, genetic mutations, drug sensitivity, immune checkpoint inhibitors(ICIs), and immunotherapy. In conclusion, our findings will facilitate a further understanding of the role of partial lactate metabolism related genes in HCC and suggest a new risk score to predict prognosis. |
format | Online Article Text |
id | pubmed-10640573 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106405732023-11-11 Characteristics of lactate metabolism phenotype in hepatocellular carcinoma Zhang, Jiacheng Dong, Keshuai Zhang, Xin Li, Chunlei Yu, Jia Wang, Weixing Sci Rep Article Hepatocellular carcinoma (HCC) is a highly heterogeneous cancer, and more effective prognostic markers are needed. Lactic acid has been proved to be an important metabolite involved in cancer development, metastasis, and the tumor microenvironment, affecting the prognosis of patients. The role of lactic acid metabolism regulators (LAMRs) in HCC is still unclear. In this study, we analyzed the status of LAMRs, a gene list containing lactate from Molecular Signatures database, in HCC and consensus clustering was performed based on these LAMRs. Cluster B showed higher infiltrations of immune cells, higher TME scores, and a poorer prognosis. We further constructed a risk score based on DEGs using LASSO and COX regression analysis between two clusters, which could effectively predict the prognosis of TCGA-LIHC patients. The GSE14520 cohort confirmed the result. We also examined the correlation of risk scores with clinical characteristics, genetic mutations, drug sensitivity, immune checkpoint inhibitors(ICIs), and immunotherapy. In conclusion, our findings will facilitate a further understanding of the role of partial lactate metabolism related genes in HCC and suggest a new risk score to predict prognosis. Nature Publishing Group UK 2023-11-11 /pmc/articles/PMC10640573/ /pubmed/37952028 http://dx.doi.org/10.1038/s41598-023-47065-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zhang, Jiacheng Dong, Keshuai Zhang, Xin Li, Chunlei Yu, Jia Wang, Weixing Characteristics of lactate metabolism phenotype in hepatocellular carcinoma |
title | Characteristics of lactate metabolism phenotype in hepatocellular carcinoma |
title_full | Characteristics of lactate metabolism phenotype in hepatocellular carcinoma |
title_fullStr | Characteristics of lactate metabolism phenotype in hepatocellular carcinoma |
title_full_unstemmed | Characteristics of lactate metabolism phenotype in hepatocellular carcinoma |
title_short | Characteristics of lactate metabolism phenotype in hepatocellular carcinoma |
title_sort | characteristics of lactate metabolism phenotype in hepatocellular carcinoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10640573/ https://www.ncbi.nlm.nih.gov/pubmed/37952028 http://dx.doi.org/10.1038/s41598-023-47065-0 |
work_keys_str_mv | AT zhangjiacheng characteristicsoflactatemetabolismphenotypeinhepatocellularcarcinoma AT dongkeshuai characteristicsoflactatemetabolismphenotypeinhepatocellularcarcinoma AT zhangxin characteristicsoflactatemetabolismphenotypeinhepatocellularcarcinoma AT lichunlei characteristicsoflactatemetabolismphenotypeinhepatocellularcarcinoma AT yujia characteristicsoflactatemetabolismphenotypeinhepatocellularcarcinoma AT wangweixing characteristicsoflactatemetabolismphenotypeinhepatocellularcarcinoma |