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Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study
Approaches for rapidly identifying patients at high risk of early breast cancer recurrence are needed. Image-based methods for prescreening hematoxylin and eosin (H&E) stained tumor slides could offer temporal and financial efficiency. We evaluated a data set of 704 1-mm tumor core H&E image...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10640636/ https://www.ncbi.nlm.nih.gov/pubmed/37952058 http://dx.doi.org/10.1038/s41523-023-00597-0 |
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author | Shi, Yifeng Olsson, Linnea T. Hoadley, Katherine A. Calhoun, Benjamin C. Marron, J. S. Geradts, Joseph Niethammer, Marc Troester, Melissa A. |
author_facet | Shi, Yifeng Olsson, Linnea T. Hoadley, Katherine A. Calhoun, Benjamin C. Marron, J. S. Geradts, Joseph Niethammer, Marc Troester, Melissa A. |
author_sort | Shi, Yifeng |
collection | PubMed |
description | Approaches for rapidly identifying patients at high risk of early breast cancer recurrence are needed. Image-based methods for prescreening hematoxylin and eosin (H&E) stained tumor slides could offer temporal and financial efficiency. We evaluated a data set of 704 1-mm tumor core H&E images (2–4 cores per case), corresponding to 202 participants (101 who recurred; 101 non-recurrent matched on age and follow-up time) from breast cancers diagnosed between 2008–2012 in the Carolina Breast Cancer Study. We leveraged deep learning to extract image information and trained a model to identify recurrence. Cross-validation accuracy for predicting recurrence was 62.4% [95% CI: 55.7, 69.1], similar to grade (65.8% [95% CI: 59.3, 72.3]) and ER status (66.3% [95% CI: 59.8, 72.8]). Interestingly, 70% (19/27) of early-recurrent low-intermediate grade tumors were identified by our image model. Relative to existing markers, image-based analyses provide complementary information for predicting early recurrence. |
format | Online Article Text |
id | pubmed-10640636 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106406362023-11-11 Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study Shi, Yifeng Olsson, Linnea T. Hoadley, Katherine A. Calhoun, Benjamin C. Marron, J. S. Geradts, Joseph Niethammer, Marc Troester, Melissa A. NPJ Breast Cancer Article Approaches for rapidly identifying patients at high risk of early breast cancer recurrence are needed. Image-based methods for prescreening hematoxylin and eosin (H&E) stained tumor slides could offer temporal and financial efficiency. We evaluated a data set of 704 1-mm tumor core H&E images (2–4 cores per case), corresponding to 202 participants (101 who recurred; 101 non-recurrent matched on age and follow-up time) from breast cancers diagnosed between 2008–2012 in the Carolina Breast Cancer Study. We leveraged deep learning to extract image information and trained a model to identify recurrence. Cross-validation accuracy for predicting recurrence was 62.4% [95% CI: 55.7, 69.1], similar to grade (65.8% [95% CI: 59.3, 72.3]) and ER status (66.3% [95% CI: 59.8, 72.8]). Interestingly, 70% (19/27) of early-recurrent low-intermediate grade tumors were identified by our image model. Relative to existing markers, image-based analyses provide complementary information for predicting early recurrence. Nature Publishing Group UK 2023-11-11 /pmc/articles/PMC10640636/ /pubmed/37952058 http://dx.doi.org/10.1038/s41523-023-00597-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Shi, Yifeng Olsson, Linnea T. Hoadley, Katherine A. Calhoun, Benjamin C. Marron, J. S. Geradts, Joseph Niethammer, Marc Troester, Melissa A. Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study |
title | Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study |
title_full | Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study |
title_fullStr | Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study |
title_full_unstemmed | Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study |
title_short | Predicting early breast cancer recurrence from histopathological images in the Carolina Breast Cancer Study |
title_sort | predicting early breast cancer recurrence from histopathological images in the carolina breast cancer study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10640636/ https://www.ncbi.nlm.nih.gov/pubmed/37952058 http://dx.doi.org/10.1038/s41523-023-00597-0 |
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