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Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip
[Image: see text] We apply the full-dimensional Semiclassical Transition State Theory (SCTST) to estimate the rate constant of glycine molecule interconversion between the VIp and Ip conformers. We have reached an electronic structure accuracy up to the explicitly correlated Coupled Cluster method (...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10641884/ https://www.ncbi.nlm.nih.gov/pubmed/37906174 http://dx.doi.org/10.1021/acs.jpclett.3c02560 |
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author | Mandelli, Giacomo Corneo, Luca Aieta, Chiara |
author_facet | Mandelli, Giacomo Corneo, Luca Aieta, Chiara |
author_sort | Mandelli, Giacomo |
collection | PubMed |
description | [Image: see text] We apply the full-dimensional Semiclassical Transition State Theory (SCTST) to estimate the rate constant of glycine molecule interconversion between the VIp and Ip conformers. We have reached an electronic structure accuracy up to the explicitly correlated Coupled Cluster method (CCSD(T)-F12b/cc-pVDZ-F12) thanks to our parallel implementation. The reaction has been experimentally investigated in the literature and is known to proceed by quantum mechanical tunneling. The SCTST rates improve over other theoretical methods, and our results align with the experimental measurements, thus confirming the accuracy of the fully coupled anharmonic semiclassical tunneling treatment, providing that the level of electronic structure theory gives a reliable estimate of the reaction barrier height and shape. The comparison with experimental half-life times supports the validity of SCTST for glycine VIp–Ip conformer conversion in the cryogenic temperature range, where this theory is usually not considered applicable due to the onset of the deep tunneling regime. |
format | Online Article Text |
id | pubmed-10641884 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-106418842023-11-15 Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip Mandelli, Giacomo Corneo, Luca Aieta, Chiara J Phys Chem Lett [Image: see text] We apply the full-dimensional Semiclassical Transition State Theory (SCTST) to estimate the rate constant of glycine molecule interconversion between the VIp and Ip conformers. We have reached an electronic structure accuracy up to the explicitly correlated Coupled Cluster method (CCSD(T)-F12b/cc-pVDZ-F12) thanks to our parallel implementation. The reaction has been experimentally investigated in the literature and is known to proceed by quantum mechanical tunneling. The SCTST rates improve over other theoretical methods, and our results align with the experimental measurements, thus confirming the accuracy of the fully coupled anharmonic semiclassical tunneling treatment, providing that the level of electronic structure theory gives a reliable estimate of the reaction barrier height and shape. The comparison with experimental half-life times supports the validity of SCTST for glycine VIp–Ip conformer conversion in the cryogenic temperature range, where this theory is usually not considered applicable due to the onset of the deep tunneling regime. American Chemical Society 2023-10-31 /pmc/articles/PMC10641884/ /pubmed/37906174 http://dx.doi.org/10.1021/acs.jpclett.3c02560 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Mandelli, Giacomo Corneo, Luca Aieta, Chiara Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip |
title | Coupled Cluster
Semiclassical Estimates of Experimental
Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip |
title_full | Coupled Cluster
Semiclassical Estimates of Experimental
Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip |
title_fullStr | Coupled Cluster
Semiclassical Estimates of Experimental
Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip |
title_full_unstemmed | Coupled Cluster
Semiclassical Estimates of Experimental
Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip |
title_short | Coupled Cluster
Semiclassical Estimates of Experimental
Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip |
title_sort | coupled cluster
semiclassical estimates of experimental
reaction rates: the interconversion of glycine conformer vip to ip |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10641884/ https://www.ncbi.nlm.nih.gov/pubmed/37906174 http://dx.doi.org/10.1021/acs.jpclett.3c02560 |
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