Cargando…

Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip

[Image: see text] We apply the full-dimensional Semiclassical Transition State Theory (SCTST) to estimate the rate constant of glycine molecule interconversion between the VIp and Ip conformers. We have reached an electronic structure accuracy up to the explicitly correlated Coupled Cluster method (...

Descripción completa

Detalles Bibliográficos
Autores principales: Mandelli, Giacomo, Corneo, Luca, Aieta, Chiara
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10641884/
https://www.ncbi.nlm.nih.gov/pubmed/37906174
http://dx.doi.org/10.1021/acs.jpclett.3c02560
_version_ 1785146850201829376
author Mandelli, Giacomo
Corneo, Luca
Aieta, Chiara
author_facet Mandelli, Giacomo
Corneo, Luca
Aieta, Chiara
author_sort Mandelli, Giacomo
collection PubMed
description [Image: see text] We apply the full-dimensional Semiclassical Transition State Theory (SCTST) to estimate the rate constant of glycine molecule interconversion between the VIp and Ip conformers. We have reached an electronic structure accuracy up to the explicitly correlated Coupled Cluster method (CCSD(T)-F12b/cc-pVDZ-F12) thanks to our parallel implementation. The reaction has been experimentally investigated in the literature and is known to proceed by quantum mechanical tunneling. The SCTST rates improve over other theoretical methods, and our results align with the experimental measurements, thus confirming the accuracy of the fully coupled anharmonic semiclassical tunneling treatment, providing that the level of electronic structure theory gives a reliable estimate of the reaction barrier height and shape. The comparison with experimental half-life times supports the validity of SCTST for glycine VIp–Ip conformer conversion in the cryogenic temperature range, where this theory is usually not considered applicable due to the onset of the deep tunneling regime.
format Online
Article
Text
id pubmed-10641884
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-106418842023-11-15 Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip Mandelli, Giacomo Corneo, Luca Aieta, Chiara J Phys Chem Lett [Image: see text] We apply the full-dimensional Semiclassical Transition State Theory (SCTST) to estimate the rate constant of glycine molecule interconversion between the VIp and Ip conformers. We have reached an electronic structure accuracy up to the explicitly correlated Coupled Cluster method (CCSD(T)-F12b/cc-pVDZ-F12) thanks to our parallel implementation. The reaction has been experimentally investigated in the literature and is known to proceed by quantum mechanical tunneling. The SCTST rates improve over other theoretical methods, and our results align with the experimental measurements, thus confirming the accuracy of the fully coupled anharmonic semiclassical tunneling treatment, providing that the level of electronic structure theory gives a reliable estimate of the reaction barrier height and shape. The comparison with experimental half-life times supports the validity of SCTST for glycine VIp–Ip conformer conversion in the cryogenic temperature range, where this theory is usually not considered applicable due to the onset of the deep tunneling regime. American Chemical Society 2023-10-31 /pmc/articles/PMC10641884/ /pubmed/37906174 http://dx.doi.org/10.1021/acs.jpclett.3c02560 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Mandelli, Giacomo
Corneo, Luca
Aieta, Chiara
Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip
title Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip
title_full Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip
title_fullStr Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip
title_full_unstemmed Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip
title_short Coupled Cluster Semiclassical Estimates of Experimental Reaction Rates: The Interconversion of Glycine Conformer VIp to Ip
title_sort coupled cluster semiclassical estimates of experimental reaction rates: the interconversion of glycine conformer vip to ip
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10641884/
https://www.ncbi.nlm.nih.gov/pubmed/37906174
http://dx.doi.org/10.1021/acs.jpclett.3c02560
work_keys_str_mv AT mandelligiacomo coupledclustersemiclassicalestimatesofexperimentalreactionratestheinterconversionofglycineconformerviptoip
AT corneoluca coupledclustersemiclassicalestimatesofexperimentalreactionratestheinterconversionofglycineconformerviptoip
AT aietachiara coupledclustersemiclassicalestimatesofexperimentalreactionratestheinterconversionofglycineconformerviptoip