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Molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments

The release of inorganic phosphate (P(i)) from actin filaments constitutes a key step in their regulated turnover, which is fundamental to many cellular functions. The mechanisms underlying P(i) release from the core and barbed end of actin filaments remain unclear. Here, using human and bovine acti...

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Autores principales: Oosterheert, Wout, Blanc, Florian E. C., Roy, Ankit, Belyy, Alexander, Sanders, Micaela Boiero, Hofnagel, Oliver, Hummer, Gerhard, Bieling, Peter, Raunser, Stefan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group US 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10643162/
https://www.ncbi.nlm.nih.gov/pubmed/37749275
http://dx.doi.org/10.1038/s41594-023-01101-9
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author Oosterheert, Wout
Blanc, Florian E. C.
Roy, Ankit
Belyy, Alexander
Sanders, Micaela Boiero
Hofnagel, Oliver
Hummer, Gerhard
Bieling, Peter
Raunser, Stefan
author_facet Oosterheert, Wout
Blanc, Florian E. C.
Roy, Ankit
Belyy, Alexander
Sanders, Micaela Boiero
Hofnagel, Oliver
Hummer, Gerhard
Bieling, Peter
Raunser, Stefan
author_sort Oosterheert, Wout
collection PubMed
description The release of inorganic phosphate (P(i)) from actin filaments constitutes a key step in their regulated turnover, which is fundamental to many cellular functions. The mechanisms underlying P(i) release from the core and barbed end of actin filaments remain unclear. Here, using human and bovine actin isoforms, we combine cryo-EM with molecular-dynamics simulations and in vitro reconstitution to demonstrate how actin releases P(i) through a ‘molecular backdoor’. While constantly open at the barbed end, the backdoor is predominantly closed in filament-core subunits and opens only transiently through concerted amino acid rearrangements. This explains why P(i) escapes rapidly from the filament end but slowly from internal subunits. In a nemaline-myopathy-associated actin variant, the backdoor is predominantly open in filament-core subunits, resulting in accelerated P(i) release and filaments with drastically shortened ADP-P(i) caps. Our results provide the molecular basis for P(i) release from actin and exemplify how a disease-linked mutation distorts the nucleotide-state distribution and atomic structure of the filament.
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spelling pubmed-106431622023-11-14 Molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments Oosterheert, Wout Blanc, Florian E. C. Roy, Ankit Belyy, Alexander Sanders, Micaela Boiero Hofnagel, Oliver Hummer, Gerhard Bieling, Peter Raunser, Stefan Nat Struct Mol Biol Article The release of inorganic phosphate (P(i)) from actin filaments constitutes a key step in their regulated turnover, which is fundamental to many cellular functions. The mechanisms underlying P(i) release from the core and barbed end of actin filaments remain unclear. Here, using human and bovine actin isoforms, we combine cryo-EM with molecular-dynamics simulations and in vitro reconstitution to demonstrate how actin releases P(i) through a ‘molecular backdoor’. While constantly open at the barbed end, the backdoor is predominantly closed in filament-core subunits and opens only transiently through concerted amino acid rearrangements. This explains why P(i) escapes rapidly from the filament end but slowly from internal subunits. In a nemaline-myopathy-associated actin variant, the backdoor is predominantly open in filament-core subunits, resulting in accelerated P(i) release and filaments with drastically shortened ADP-P(i) caps. Our results provide the molecular basis for P(i) release from actin and exemplify how a disease-linked mutation distorts the nucleotide-state distribution and atomic structure of the filament. Nature Publishing Group US 2023-09-25 2023 /pmc/articles/PMC10643162/ /pubmed/37749275 http://dx.doi.org/10.1038/s41594-023-01101-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Oosterheert, Wout
Blanc, Florian E. C.
Roy, Ankit
Belyy, Alexander
Sanders, Micaela Boiero
Hofnagel, Oliver
Hummer, Gerhard
Bieling, Peter
Raunser, Stefan
Molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments
title Molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments
title_full Molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments
title_fullStr Molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments
title_full_unstemmed Molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments
title_short Molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments
title_sort molecular mechanisms of inorganic-phosphate release from the core and barbed end of actin filaments
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10643162/
https://www.ncbi.nlm.nih.gov/pubmed/37749275
http://dx.doi.org/10.1038/s41594-023-01101-9
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