Cargando…

Insertion/deletion polymorphism for genetic background and forensic performance exploration of the Sui group from Guizhou

Insertion/deletion polymorphisms (InDels) as ideal genetic markers for forensic genetics are appreciated by scholars both nationally and internationally because they integrated the favorable features of single nucleotide polymorphisms (SNPs) and short tandem repeats (STRs). Nevertheless, with the li...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Xiaoxue, Zhang, Hongling, Wang, Qiyan, Yang, Meiqing, Liu, Yubo, Ran, Qianchong, Huang, Chunli, Huang, Jiang, Ren, Zheng, Jin, Xiaoye
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10643464/
https://www.ncbi.nlm.nih.gov/pubmed/38027767
http://dx.doi.org/10.1016/j.heliyon.2023.e21384
_version_ 1785134359774232576
author Wang, Xiaoxue
Zhang, Hongling
Wang, Qiyan
Yang, Meiqing
Liu, Yubo
Ran, Qianchong
Huang, Chunli
Huang, Jiang
Ren, Zheng
Jin, Xiaoye
author_facet Wang, Xiaoxue
Zhang, Hongling
Wang, Qiyan
Yang, Meiqing
Liu, Yubo
Ran, Qianchong
Huang, Chunli
Huang, Jiang
Ren, Zheng
Jin, Xiaoye
author_sort Wang, Xiaoxue
collection PubMed
description Insertion/deletion polymorphisms (InDels) as ideal genetic markers for forensic genetics are appreciated by scholars both nationally and internationally because they integrated the favorable features of single nucleotide polymorphisms (SNPs) and short tandem repeats (STRs). Nevertheless, with the limited identification efficiency of InDels, the multiplex amplification systems of InDels might just be applied as the supplementary methods in paternity testing with respect to commonly used STRs. In the current research, we successfully genotyped 105 unrelated individuals from the Guizhou Sui population based on a six-color fluorescence multiplex panel that could simultaneously detect 64 genetic markers (59 autosomal InDels, two autosomal miniSTRs and three Y chromosomal genetic markers). In addition, frequency distributions and forensic statistical parameters of these loci in the Sui group were assessed using the STRAF software. Phylogenetic relationships among the Sui group and other reference populations were dissected by two methods (principal component analysis and phylogenetic trees) based on 59 InDels. The combined discrimination power and probability of exclusion values of 61 autosomal genetic markers in the Sui group were nearly equal to 1–1.90063 × 10(−27) and 0.999998272, respectively. Furthermore, we observed that the Sui group from Guizhou had closer genetic affinities with East Asian populations with respect to other continental populations. In summary, we stated that the multiplex amplification system might be utilized as a prospective independent tool for human individual identification and parentage testing in the Sui group residing in Guizhou.
format Online
Article
Text
id pubmed-10643464
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-106434642023-10-29 Insertion/deletion polymorphism for genetic background and forensic performance exploration of the Sui group from Guizhou Wang, Xiaoxue Zhang, Hongling Wang, Qiyan Yang, Meiqing Liu, Yubo Ran, Qianchong Huang, Chunli Huang, Jiang Ren, Zheng Jin, Xiaoye Heliyon Research Article Insertion/deletion polymorphisms (InDels) as ideal genetic markers for forensic genetics are appreciated by scholars both nationally and internationally because they integrated the favorable features of single nucleotide polymorphisms (SNPs) and short tandem repeats (STRs). Nevertheless, with the limited identification efficiency of InDels, the multiplex amplification systems of InDels might just be applied as the supplementary methods in paternity testing with respect to commonly used STRs. In the current research, we successfully genotyped 105 unrelated individuals from the Guizhou Sui population based on a six-color fluorescence multiplex panel that could simultaneously detect 64 genetic markers (59 autosomal InDels, two autosomal miniSTRs and three Y chromosomal genetic markers). In addition, frequency distributions and forensic statistical parameters of these loci in the Sui group were assessed using the STRAF software. Phylogenetic relationships among the Sui group and other reference populations were dissected by two methods (principal component analysis and phylogenetic trees) based on 59 InDels. The combined discrimination power and probability of exclusion values of 61 autosomal genetic markers in the Sui group were nearly equal to 1–1.90063 × 10(−27) and 0.999998272, respectively. Furthermore, we observed that the Sui group from Guizhou had closer genetic affinities with East Asian populations with respect to other continental populations. In summary, we stated that the multiplex amplification system might be utilized as a prospective independent tool for human individual identification and parentage testing in the Sui group residing in Guizhou. Elsevier 2023-10-29 /pmc/articles/PMC10643464/ /pubmed/38027767 http://dx.doi.org/10.1016/j.heliyon.2023.e21384 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Wang, Xiaoxue
Zhang, Hongling
Wang, Qiyan
Yang, Meiqing
Liu, Yubo
Ran, Qianchong
Huang, Chunli
Huang, Jiang
Ren, Zheng
Jin, Xiaoye
Insertion/deletion polymorphism for genetic background and forensic performance exploration of the Sui group from Guizhou
title Insertion/deletion polymorphism for genetic background and forensic performance exploration of the Sui group from Guizhou
title_full Insertion/deletion polymorphism for genetic background and forensic performance exploration of the Sui group from Guizhou
title_fullStr Insertion/deletion polymorphism for genetic background and forensic performance exploration of the Sui group from Guizhou
title_full_unstemmed Insertion/deletion polymorphism for genetic background and forensic performance exploration of the Sui group from Guizhou
title_short Insertion/deletion polymorphism for genetic background and forensic performance exploration of the Sui group from Guizhou
title_sort insertion/deletion polymorphism for genetic background and forensic performance exploration of the sui group from guizhou
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10643464/
https://www.ncbi.nlm.nih.gov/pubmed/38027767
http://dx.doi.org/10.1016/j.heliyon.2023.e21384
work_keys_str_mv AT wangxiaoxue insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT zhanghongling insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT wangqiyan insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT yangmeiqing insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT liuyubo insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT ranqianchong insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT huangchunli insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT huangjiang insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT renzheng insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou
AT jinxiaoye insertiondeletionpolymorphismforgeneticbackgroundandforensicperformanceexplorationofthesuigroupfromguizhou