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REAP-2: An interactive quantitative tool for robust and efficient dose-response curve estimation
REAP-2 is an interactive dose-response curve estimation tool for Robust and Efficient Assessment of drug Potency. It provides user-friendly dose-response curve estimation for in vitro studies and conducts statistical testing for model comparisons with a redesigned user interface. We also make a majo...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cambridge University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10643933/ https://www.ncbi.nlm.nih.gov/pubmed/38028338 http://dx.doi.org/10.1017/cts.2023.642 |
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author | Fang, Xinying Liu, Xinyi Chinchilli, Vernon M. Wang, Michael Wang, Hong-Gang Dokholyan, Nikolay V. Shen, Chan Lee, J. Jack Zhou, Shouhao |
author_facet | Fang, Xinying Liu, Xinyi Chinchilli, Vernon M. Wang, Michael Wang, Hong-Gang Dokholyan, Nikolay V. Shen, Chan Lee, J. Jack Zhou, Shouhao |
author_sort | Fang, Xinying |
collection | PubMed |
description | REAP-2 is an interactive dose-response curve estimation tool for Robust and Efficient Assessment of drug Potency. It provides user-friendly dose-response curve estimation for in vitro studies and conducts statistical testing for model comparisons with a redesigned user interface. We also make a major update of the underlying estimation method with penalized beta regression, which demonstrates great reliability and accuracy in dose estimation and uncertainty quantification. In this note, we describe the method and implementation of REAP-2 with a highlight on potency estimation and drug comparison. |
format | Online Article Text |
id | pubmed-10643933 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cambridge University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-106439332023-10-13 REAP-2: An interactive quantitative tool for robust and efficient dose-response curve estimation Fang, Xinying Liu, Xinyi Chinchilli, Vernon M. Wang, Michael Wang, Hong-Gang Dokholyan, Nikolay V. Shen, Chan Lee, J. Jack Zhou, Shouhao J Clin Transl Sci Brief Report REAP-2 is an interactive dose-response curve estimation tool for Robust and Efficient Assessment of drug Potency. It provides user-friendly dose-response curve estimation for in vitro studies and conducts statistical testing for model comparisons with a redesigned user interface. We also make a major update of the underlying estimation method with penalized beta regression, which demonstrates great reliability and accuracy in dose estimation and uncertainty quantification. In this note, we describe the method and implementation of REAP-2 with a highlight on potency estimation and drug comparison. Cambridge University Press 2023-10-13 /pmc/articles/PMC10643933/ /pubmed/38028338 http://dx.doi.org/10.1017/cts.2023.642 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited. |
spellingShingle | Brief Report Fang, Xinying Liu, Xinyi Chinchilli, Vernon M. Wang, Michael Wang, Hong-Gang Dokholyan, Nikolay V. Shen, Chan Lee, J. Jack Zhou, Shouhao REAP-2: An interactive quantitative tool for robust and efficient dose-response curve estimation |
title | REAP-2: An interactive quantitative tool for robust and efficient dose-response curve estimation |
title_full | REAP-2: An interactive quantitative tool for robust and efficient dose-response curve estimation |
title_fullStr | REAP-2: An interactive quantitative tool for robust and efficient dose-response curve estimation |
title_full_unstemmed | REAP-2: An interactive quantitative tool for robust and efficient dose-response curve estimation |
title_short | REAP-2: An interactive quantitative tool for robust and efficient dose-response curve estimation |
title_sort | reap-2: an interactive quantitative tool for robust and efficient dose-response curve estimation |
topic | Brief Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10643933/ https://www.ncbi.nlm.nih.gov/pubmed/38028338 http://dx.doi.org/10.1017/cts.2023.642 |
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