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PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum

BACKGROUND/AIMS: Adenocarcinoma of the rectum (READ) is typically diagnosed at advanced stages due to a lack of early-onset specific features. MATERIALS AND METHODS: The study used bioinformatics analysis of READ ribonucleic acid sequencing data from The Cancer Genome Atlas database to identify diff...

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Autor principal: Xie, Keju
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Turkish Society of Gastroenterology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10645281/
https://www.ncbi.nlm.nih.gov/pubmed/37737218
http://dx.doi.org/10.5152/tjg.2023.23189
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author Xie, Keju
author_facet Xie, Keju
author_sort Xie, Keju
collection PubMed
description BACKGROUND/AIMS: Adenocarcinoma of the rectum (READ) is typically diagnosed at advanced stages due to a lack of early-onset specific features. MATERIALS AND METHODS: The study used bioinformatics analysis of READ ribonucleic acid sequencing data from The Cancer Genome Atlas database to identify differentially expressed genes (DEGs). Overlapping genes between DEGs and autophagy-associated genes were screened for prognosis-associated DEGs, which were then validated in the OncoLnc database. RESULTS: A total of 129 autophagy-associated DEGs were identified, with 17 genes found to be associated with READ prognosis. Multivariate Cox regression analysis revealed that only the PHLPP2 gene was significantly associated with READ prognosis (hazard ratio = 0.442, P = .026), and its low expression correlated with low survival in patients with brain lower-grade glioma (P = .00623) and pancreatic adenocarcinoma (P = .00109). CONCLUSIONS: PHLPP2 expression may serve as a READ-specific prognostic biomarker and is involved in the PI3K-Akt signaling pathway.
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spelling pubmed-106452812023-11-15 PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum Xie, Keju Turk J Gastroenterol Original Article BACKGROUND/AIMS: Adenocarcinoma of the rectum (READ) is typically diagnosed at advanced stages due to a lack of early-onset specific features. MATERIALS AND METHODS: The study used bioinformatics analysis of READ ribonucleic acid sequencing data from The Cancer Genome Atlas database to identify differentially expressed genes (DEGs). Overlapping genes between DEGs and autophagy-associated genes were screened for prognosis-associated DEGs, which were then validated in the OncoLnc database. RESULTS: A total of 129 autophagy-associated DEGs were identified, with 17 genes found to be associated with READ prognosis. Multivariate Cox regression analysis revealed that only the PHLPP2 gene was significantly associated with READ prognosis (hazard ratio = 0.442, P = .026), and its low expression correlated with low survival in patients with brain lower-grade glioma (P = .00623) and pancreatic adenocarcinoma (P = .00109). CONCLUSIONS: PHLPP2 expression may serve as a READ-specific prognostic biomarker and is involved in the PI3K-Akt signaling pathway. Turkish Society of Gastroenterology 2023-10-01 /pmc/articles/PMC10645281/ /pubmed/37737218 http://dx.doi.org/10.5152/tjg.2023.23189 Text en © 2023 authors https://creativecommons.org/licenses/by/4.0/ Content of this journal is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License. (https://creativecommons.org/licenses/by/4.0/)
spellingShingle Original Article
Xie, Keju
PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum
title PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum
title_full PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum
title_fullStr PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum
title_full_unstemmed PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum
title_short PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum
title_sort phlpp2: a prognostic biomarker in adenocarcinoma of the rectum
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10645281/
https://www.ncbi.nlm.nih.gov/pubmed/37737218
http://dx.doi.org/10.5152/tjg.2023.23189
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