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PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum
BACKGROUND/AIMS: Adenocarcinoma of the rectum (READ) is typically diagnosed at advanced stages due to a lack of early-onset specific features. MATERIALS AND METHODS: The study used bioinformatics analysis of READ ribonucleic acid sequencing data from The Cancer Genome Atlas database to identify diff...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Turkish Society of Gastroenterology
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10645281/ https://www.ncbi.nlm.nih.gov/pubmed/37737218 http://dx.doi.org/10.5152/tjg.2023.23189 |
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author | Xie, Keju |
author_facet | Xie, Keju |
author_sort | Xie, Keju |
collection | PubMed |
description | BACKGROUND/AIMS: Adenocarcinoma of the rectum (READ) is typically diagnosed at advanced stages due to a lack of early-onset specific features. MATERIALS AND METHODS: The study used bioinformatics analysis of READ ribonucleic acid sequencing data from The Cancer Genome Atlas database to identify differentially expressed genes (DEGs). Overlapping genes between DEGs and autophagy-associated genes were screened for prognosis-associated DEGs, which were then validated in the OncoLnc database. RESULTS: A total of 129 autophagy-associated DEGs were identified, with 17 genes found to be associated with READ prognosis. Multivariate Cox regression analysis revealed that only the PHLPP2 gene was significantly associated with READ prognosis (hazard ratio = 0.442, P = .026), and its low expression correlated with low survival in patients with brain lower-grade glioma (P = .00623) and pancreatic adenocarcinoma (P = .00109). CONCLUSIONS: PHLPP2 expression may serve as a READ-specific prognostic biomarker and is involved in the PI3K-Akt signaling pathway. |
format | Online Article Text |
id | pubmed-10645281 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Turkish Society of Gastroenterology |
record_format | MEDLINE/PubMed |
spelling | pubmed-106452812023-11-15 PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum Xie, Keju Turk J Gastroenterol Original Article BACKGROUND/AIMS: Adenocarcinoma of the rectum (READ) is typically diagnosed at advanced stages due to a lack of early-onset specific features. MATERIALS AND METHODS: The study used bioinformatics analysis of READ ribonucleic acid sequencing data from The Cancer Genome Atlas database to identify differentially expressed genes (DEGs). Overlapping genes between DEGs and autophagy-associated genes were screened for prognosis-associated DEGs, which were then validated in the OncoLnc database. RESULTS: A total of 129 autophagy-associated DEGs were identified, with 17 genes found to be associated with READ prognosis. Multivariate Cox regression analysis revealed that only the PHLPP2 gene was significantly associated with READ prognosis (hazard ratio = 0.442, P = .026), and its low expression correlated with low survival in patients with brain lower-grade glioma (P = .00623) and pancreatic adenocarcinoma (P = .00109). CONCLUSIONS: PHLPP2 expression may serve as a READ-specific prognostic biomarker and is involved in the PI3K-Akt signaling pathway. Turkish Society of Gastroenterology 2023-10-01 /pmc/articles/PMC10645281/ /pubmed/37737218 http://dx.doi.org/10.5152/tjg.2023.23189 Text en © 2023 authors https://creativecommons.org/licenses/by/4.0/ Content of this journal is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License. (https://creativecommons.org/licenses/by/4.0/) |
spellingShingle | Original Article Xie, Keju PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum |
title | PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum |
title_full | PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum |
title_fullStr | PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum |
title_full_unstemmed | PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum |
title_short | PHLPP2: A Prognostic Biomarker in Adenocarcinoma of the Rectum |
title_sort | phlpp2: a prognostic biomarker in adenocarcinoma of the rectum |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10645281/ https://www.ncbi.nlm.nih.gov/pubmed/37737218 http://dx.doi.org/10.5152/tjg.2023.23189 |
work_keys_str_mv | AT xiekeju phlpp2aprognosticbiomarkerinadenocarcinomaoftherectum |