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Identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer
BACKGROUND: Breast cancer (BCa) is a major challenge for women’s health worldwide. Ferroptosis is closely related to tumorigenesis and cancer progression. However, the prognostic value of ferroptosis-related genes in BCa remains unclear, and more accurate prognostic models are urgently needed. METHO...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10645672/ https://www.ncbi.nlm.nih.gov/pubmed/37728703 http://dx.doi.org/10.1007/s00432-023-05423-5 |
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author | Cheng, Tian- cheng Wu, Jia-hao Zhu, Bei Gao, Hai-yan Zheng, Lin Chen, Wei-xian |
author_facet | Cheng, Tian- cheng Wu, Jia-hao Zhu, Bei Gao, Hai-yan Zheng, Lin Chen, Wei-xian |
author_sort | Cheng, Tian- cheng |
collection | PubMed |
description | BACKGROUND: Breast cancer (BCa) is a major challenge for women’s health worldwide. Ferroptosis is closely related to tumorigenesis and cancer progression. However, the prognostic value of ferroptosis-related genes in BCa remains unclear, and more accurate prognostic models are urgently needed. METHODS: Gene expression profiles and clinical information of BCa patients were collected from public databases. LASSO and multivariate Cox regression analysis were utilized to construct the prognostic gene signature. Kaplan–Meier plotter, receiver operating characteristic (ROC) curves, and nomogram were used to validate the prognostic value of the gene signature. Gene set enrichment analysis was performed to explore the molecular functions and signaling pathways. RESULTS: Differentially expressed ferroptosis-related genes between BCa samples and normal tissues were obtained. A novel five-gene signature including BCL2, SLC40A1, TFF1, APOOL, and PRAME was established for prognosis prediction. Patients stratified into high-risk or low-risk group displayed significantly different survival. Kaplan–Meier and ROC curves showed a good performance for survival prediction in different cohorts. Biological function analysis revealed that the five-gene signature was associated with cancer progression, immune infiltration, immune response, and drug resistance. Nomogram including the five-gene signature was established. CONCLUSION: A novel five ferroptosis-related gene signature and nomogram could be used for prognostic prediction in BCa. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00432-023-05423-5. |
format | Online Article Text |
id | pubmed-10645672 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-106456722023-11-14 Identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer Cheng, Tian- cheng Wu, Jia-hao Zhu, Bei Gao, Hai-yan Zheng, Lin Chen, Wei-xian J Cancer Res Clin Oncol Research BACKGROUND: Breast cancer (BCa) is a major challenge for women’s health worldwide. Ferroptosis is closely related to tumorigenesis and cancer progression. However, the prognostic value of ferroptosis-related genes in BCa remains unclear, and more accurate prognostic models are urgently needed. METHODS: Gene expression profiles and clinical information of BCa patients were collected from public databases. LASSO and multivariate Cox regression analysis were utilized to construct the prognostic gene signature. Kaplan–Meier plotter, receiver operating characteristic (ROC) curves, and nomogram were used to validate the prognostic value of the gene signature. Gene set enrichment analysis was performed to explore the molecular functions and signaling pathways. RESULTS: Differentially expressed ferroptosis-related genes between BCa samples and normal tissues were obtained. A novel five-gene signature including BCL2, SLC40A1, TFF1, APOOL, and PRAME was established for prognosis prediction. Patients stratified into high-risk or low-risk group displayed significantly different survival. Kaplan–Meier and ROC curves showed a good performance for survival prediction in different cohorts. Biological function analysis revealed that the five-gene signature was associated with cancer progression, immune infiltration, immune response, and drug resistance. Nomogram including the five-gene signature was established. CONCLUSION: A novel five ferroptosis-related gene signature and nomogram could be used for prognostic prediction in BCa. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00432-023-05423-5. Springer Berlin Heidelberg 2023-09-20 2023 /pmc/articles/PMC10645672/ /pubmed/37728703 http://dx.doi.org/10.1007/s00432-023-05423-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Cheng, Tian- cheng Wu, Jia-hao Zhu, Bei Gao, Hai-yan Zheng, Lin Chen, Wei-xian Identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer |
title | Identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer |
title_full | Identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer |
title_fullStr | Identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer |
title_full_unstemmed | Identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer |
title_short | Identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer |
title_sort | identification of a novel five ferroptosis-related gene signature as a promising prognostic model for breast cancer |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10645672/ https://www.ncbi.nlm.nih.gov/pubmed/37728703 http://dx.doi.org/10.1007/s00432-023-05423-5 |
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