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Hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection

Brain surgery is one of the most common and effective treatments for brain tumour. However, neurosurgeons face the challenge of determining the boundaries of the tumour to achieve maximum resection, while avoiding damage to normal tissue that may cause neurological sequelae to patients. Hyperspectra...

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Autores principales: Leon, Raquel, Fabelo, Himar, Ortega, Samuel, Cruz-Guerrero, Ines A., Campos-Delgado, Daniel Ulises, Szolna, Adam, Piñeiro, Juan F., Espino, Carlos, O’Shanahan, Aruma J., Hernandez, Maria, Carrera, David, Bisshopp, Sara, Sosa, Coralia, Balea-Fernandez, Francisco J., Morera, Jesus, Clavo, Bernardino, Callico, Gustavo M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10646050/
https://www.ncbi.nlm.nih.gov/pubmed/37964078
http://dx.doi.org/10.1038/s41698-023-00475-9
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author Leon, Raquel
Fabelo, Himar
Ortega, Samuel
Cruz-Guerrero, Ines A.
Campos-Delgado, Daniel Ulises
Szolna, Adam
Piñeiro, Juan F.
Espino, Carlos
O’Shanahan, Aruma J.
Hernandez, Maria
Carrera, David
Bisshopp, Sara
Sosa, Coralia
Balea-Fernandez, Francisco J.
Morera, Jesus
Clavo, Bernardino
Callico, Gustavo M.
author_facet Leon, Raquel
Fabelo, Himar
Ortega, Samuel
Cruz-Guerrero, Ines A.
Campos-Delgado, Daniel Ulises
Szolna, Adam
Piñeiro, Juan F.
Espino, Carlos
O’Shanahan, Aruma J.
Hernandez, Maria
Carrera, David
Bisshopp, Sara
Sosa, Coralia
Balea-Fernandez, Francisco J.
Morera, Jesus
Clavo, Bernardino
Callico, Gustavo M.
author_sort Leon, Raquel
collection PubMed
description Brain surgery is one of the most common and effective treatments for brain tumour. However, neurosurgeons face the challenge of determining the boundaries of the tumour to achieve maximum resection, while avoiding damage to normal tissue that may cause neurological sequelae to patients. Hyperspectral (HS) imaging (HSI) has shown remarkable results as a diagnostic tool for tumour detection in different medical applications. In this work, we demonstrate, with a robust k-fold cross-validation approach, that HSI combined with the proposed processing framework is a promising intraoperative tool for in-vivo identification and delineation of brain tumours, including both primary (high-grade and low-grade) and secondary tumours. Analysis of the in-vivo brain database, consisting of 61 HS images from 34 different patients, achieve a highest median macro F1-Score result of 70.2 ± 7.9% on the test set using both spectral and spatial information. Here, we provide a benchmark based on machine learning for further developments in the field of in-vivo brain tumour detection and delineation using hyperspectral imaging to be used as a real-time decision support tool during neurosurgical workflows.
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spelling pubmed-106460502023-11-14 Hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection Leon, Raquel Fabelo, Himar Ortega, Samuel Cruz-Guerrero, Ines A. Campos-Delgado, Daniel Ulises Szolna, Adam Piñeiro, Juan F. Espino, Carlos O’Shanahan, Aruma J. Hernandez, Maria Carrera, David Bisshopp, Sara Sosa, Coralia Balea-Fernandez, Francisco J. Morera, Jesus Clavo, Bernardino Callico, Gustavo M. NPJ Precis Oncol Article Brain surgery is one of the most common and effective treatments for brain tumour. However, neurosurgeons face the challenge of determining the boundaries of the tumour to achieve maximum resection, while avoiding damage to normal tissue that may cause neurological sequelae to patients. Hyperspectral (HS) imaging (HSI) has shown remarkable results as a diagnostic tool for tumour detection in different medical applications. In this work, we demonstrate, with a robust k-fold cross-validation approach, that HSI combined with the proposed processing framework is a promising intraoperative tool for in-vivo identification and delineation of brain tumours, including both primary (high-grade and low-grade) and secondary tumours. Analysis of the in-vivo brain database, consisting of 61 HS images from 34 different patients, achieve a highest median macro F1-Score result of 70.2 ± 7.9% on the test set using both spectral and spatial information. Here, we provide a benchmark based on machine learning for further developments in the field of in-vivo brain tumour detection and delineation using hyperspectral imaging to be used as a real-time decision support tool during neurosurgical workflows. Nature Publishing Group UK 2023-11-14 /pmc/articles/PMC10646050/ /pubmed/37964078 http://dx.doi.org/10.1038/s41698-023-00475-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Leon, Raquel
Fabelo, Himar
Ortega, Samuel
Cruz-Guerrero, Ines A.
Campos-Delgado, Daniel Ulises
Szolna, Adam
Piñeiro, Juan F.
Espino, Carlos
O’Shanahan, Aruma J.
Hernandez, Maria
Carrera, David
Bisshopp, Sara
Sosa, Coralia
Balea-Fernandez, Francisco J.
Morera, Jesus
Clavo, Bernardino
Callico, Gustavo M.
Hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection
title Hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection
title_full Hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection
title_fullStr Hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection
title_full_unstemmed Hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection
title_short Hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection
title_sort hyperspectral imaging benchmark based on machine learning for intraoperative brain tumour detection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10646050/
https://www.ncbi.nlm.nih.gov/pubmed/37964078
http://dx.doi.org/10.1038/s41698-023-00475-9
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