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Spiking neural networks fine-tuning for brain image segmentation

INTRODUCTION: The field of machine learning has undergone a significant transformation with the progress of deep artificial neural networks (ANNs) and the growing accessibility of annotated data. ANNs usually require substantial power and memory usage to achieve optimal performance. Spiking neural n...

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Detalles Bibliográficos
Autores principales: Yue, Ye, Baltes, Marc, Abuhajar, Nidal, Sun, Tao, Karanth, Avinash, Smith, Charles D., Bihl, Trevor, Liu, Jundong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10646327/
https://www.ncbi.nlm.nih.gov/pubmed/38027484
http://dx.doi.org/10.3389/fnins.2023.1267639
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author Yue, Ye
Baltes, Marc
Abuhajar, Nidal
Sun, Tao
Karanth, Avinash
Smith, Charles D.
Bihl, Trevor
Liu, Jundong
author_facet Yue, Ye
Baltes, Marc
Abuhajar, Nidal
Sun, Tao
Karanth, Avinash
Smith, Charles D.
Bihl, Trevor
Liu, Jundong
author_sort Yue, Ye
collection PubMed
description INTRODUCTION: The field of machine learning has undergone a significant transformation with the progress of deep artificial neural networks (ANNs) and the growing accessibility of annotated data. ANNs usually require substantial power and memory usage to achieve optimal performance. Spiking neural networks (SNNs) have recently emerged as a low-power alternative to ANNs due to their sparsity nature. Despite their energy efficiency, SNNs are generally more difficult to be trained than ANNs. METHODS: In this study, we propose a novel three-stage SNN training scheme designed specifically for segmenting human hippocampi from magnetic resonance images. Our training pipeline starts with optimizing an ANN to its maximum capacity, then employs a quick ANN-SNN conversion to initialize the corresponding spiking network. This is followed by spike-based backpropagation to fine-tune the converted SNN. In order to understand the reason behind performance decline in the converted SNNs, we conduct a set of experiments to investigate the output scaling issue. Furthermore, we explore the impact of binary and ternary representations in SNN networks and conduct an empirical evaluation of their performance through image classification and segmentation tasks. RESULTS AND DISCUSSION: By employing our hybrid training scheme, we observe significant advantages over both ANN-SNN conversion and direct SNN training solutions in terms of segmentation accuracy and training efficiency. Experimental results demonstrate the effectiveness of our model in achieving our design goals.
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spelling pubmed-106463272023-01-01 Spiking neural networks fine-tuning for brain image segmentation Yue, Ye Baltes, Marc Abuhajar, Nidal Sun, Tao Karanth, Avinash Smith, Charles D. Bihl, Trevor Liu, Jundong Front Neurosci Neuroscience INTRODUCTION: The field of machine learning has undergone a significant transformation with the progress of deep artificial neural networks (ANNs) and the growing accessibility of annotated data. ANNs usually require substantial power and memory usage to achieve optimal performance. Spiking neural networks (SNNs) have recently emerged as a low-power alternative to ANNs due to their sparsity nature. Despite their energy efficiency, SNNs are generally more difficult to be trained than ANNs. METHODS: In this study, we propose a novel three-stage SNN training scheme designed specifically for segmenting human hippocampi from magnetic resonance images. Our training pipeline starts with optimizing an ANN to its maximum capacity, then employs a quick ANN-SNN conversion to initialize the corresponding spiking network. This is followed by spike-based backpropagation to fine-tune the converted SNN. In order to understand the reason behind performance decline in the converted SNNs, we conduct a set of experiments to investigate the output scaling issue. Furthermore, we explore the impact of binary and ternary representations in SNN networks and conduct an empirical evaluation of their performance through image classification and segmentation tasks. RESULTS AND DISCUSSION: By employing our hybrid training scheme, we observe significant advantages over both ANN-SNN conversion and direct SNN training solutions in terms of segmentation accuracy and training efficiency. Experimental results demonstrate the effectiveness of our model in achieving our design goals. Frontiers Media S.A. 2023-11-01 /pmc/articles/PMC10646327/ /pubmed/38027484 http://dx.doi.org/10.3389/fnins.2023.1267639 Text en Copyright © 2023 Yue, Baltes, Abuhajar, Sun, Karanth, Smith, Bihl and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Yue, Ye
Baltes, Marc
Abuhajar, Nidal
Sun, Tao
Karanth, Avinash
Smith, Charles D.
Bihl, Trevor
Liu, Jundong
Spiking neural networks fine-tuning for brain image segmentation
title Spiking neural networks fine-tuning for brain image segmentation
title_full Spiking neural networks fine-tuning for brain image segmentation
title_fullStr Spiking neural networks fine-tuning for brain image segmentation
title_full_unstemmed Spiking neural networks fine-tuning for brain image segmentation
title_short Spiking neural networks fine-tuning for brain image segmentation
title_sort spiking neural networks fine-tuning for brain image segmentation
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10646327/
https://www.ncbi.nlm.nih.gov/pubmed/38027484
http://dx.doi.org/10.3389/fnins.2023.1267639
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