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Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting

The vast microbial biodiversity of soils is beginning to be observed and understood by applying modern DNA sequencing techniques. However, ensuring this potentially valuable information is used in a fair and equitable way remains a challenge. Here, we present a public engagement project that explore...

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Autores principales: Tarnowski, Matthew J., Varliero, Gilda, Scown, Jim, Phelps, Emily, Gorochowski, Thomas E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10646459/
https://www.ncbi.nlm.nih.gov/pubmed/38026022
http://dx.doi.org/10.1098/rsos.230963
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author Tarnowski, Matthew J.
Varliero, Gilda
Scown, Jim
Phelps, Emily
Gorochowski, Thomas E.
author_facet Tarnowski, Matthew J.
Varliero, Gilda
Scown, Jim
Phelps, Emily
Gorochowski, Thomas E.
author_sort Tarnowski, Matthew J.
collection PubMed
description The vast microbial biodiversity of soils is beginning to be observed and understood by applying modern DNA sequencing techniques. However, ensuring this potentially valuable information is used in a fair and equitable way remains a challenge. Here, we present a public engagement project that explores this topic through collaborative research of soil microbiomes at six urban locations using nanopore-based DNA sequencing. The project brought together researchers from the disciplines of synthetic biology, environmental humanities and microbial ecology, as well as school students aged 14–16 years old, to gain a broader understanding of views on the use of data from the environment. Discussions led to the transformation of ‘bioprospecting’, a metaphor with extractive connotations which is often used to frame environmental DNA sequencing studies, towards a more collaborative approach—‘biorespecting’. This shift in terminology acknowledges that genetic information contained in soil arises as a result of entire ecosystems, including the people involved in its creation. Therefore, any use of sequence information should be accountable to the ecosystems from which it arose. As knowledge can arise from ecosystems and communities, science and technology should acknowledge this link and reciprocate with care and benefit-sharing to help improve the wellbeing of future generations.
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spelling pubmed-106464592023-11-15 Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting Tarnowski, Matthew J. Varliero, Gilda Scown, Jim Phelps, Emily Gorochowski, Thomas E. R Soc Open Sci Ecology, Conservation and Global Change Biology The vast microbial biodiversity of soils is beginning to be observed and understood by applying modern DNA sequencing techniques. However, ensuring this potentially valuable information is used in a fair and equitable way remains a challenge. Here, we present a public engagement project that explores this topic through collaborative research of soil microbiomes at six urban locations using nanopore-based DNA sequencing. The project brought together researchers from the disciplines of synthetic biology, environmental humanities and microbial ecology, as well as school students aged 14–16 years old, to gain a broader understanding of views on the use of data from the environment. Discussions led to the transformation of ‘bioprospecting’, a metaphor with extractive connotations which is often used to frame environmental DNA sequencing studies, towards a more collaborative approach—‘biorespecting’. This shift in terminology acknowledges that genetic information contained in soil arises as a result of entire ecosystems, including the people involved in its creation. Therefore, any use of sequence information should be accountable to the ecosystems from which it arose. As knowledge can arise from ecosystems and communities, science and technology should acknowledge this link and reciprocate with care and benefit-sharing to help improve the wellbeing of future generations. The Royal Society 2023-11-15 /pmc/articles/PMC10646459/ /pubmed/38026022 http://dx.doi.org/10.1098/rsos.230963 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Ecology, Conservation and Global Change Biology
Tarnowski, Matthew J.
Varliero, Gilda
Scown, Jim
Phelps, Emily
Gorochowski, Thomas E.
Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting
title Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting
title_full Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting
title_fullStr Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting
title_full_unstemmed Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting
title_short Soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting
title_sort soil as a transdisciplinary research catalyst: from bioprospecting to biorespecting
topic Ecology, Conservation and Global Change Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10646459/
https://www.ncbi.nlm.nih.gov/pubmed/38026022
http://dx.doi.org/10.1098/rsos.230963
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