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Force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects

We introduce FENNIX (Force-Field-Enhanced Neural Network InteraXions), a hybrid approach between machine-learning and force-fields. We leverage state-of-the-art equivariant neural networks to predict local energy contributions and multiple atom-in-molecule properties that are then used as geometry-d...

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Autores principales: Plé, Thomas, Lagardère, Louis, Piquemal, Jean-Philip
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10646944/
https://www.ncbi.nlm.nih.gov/pubmed/38020379
http://dx.doi.org/10.1039/d3sc02581k
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author Plé, Thomas
Lagardère, Louis
Piquemal, Jean-Philip
author_facet Plé, Thomas
Lagardère, Louis
Piquemal, Jean-Philip
author_sort Plé, Thomas
collection PubMed
description We introduce FENNIX (Force-Field-Enhanced Neural Network InteraXions), a hybrid approach between machine-learning and force-fields. We leverage state-of-the-art equivariant neural networks to predict local energy contributions and multiple atom-in-molecule properties that are then used as geometry-dependent parameters for physically-motivated energy terms which account for long-range electrostatics and dispersion. Using high-accuracy ab initio data (small organic molecules/dimers), we trained a first version of the model. Exhibiting accurate gas-phase energy predictions, FENNIX is transferable to the condensed phase. It is able to produce stable Molecular Dynamics simulations, including nuclear quantum effects, for water predicting accurate liquid properties. The extrapolating power of the hybrid physically-driven machine learning FENNIX approach is exemplified by computing: (i) the solvated alanine dipeptide free energy landscape; (ii) the reactive dissociation of small molecules.
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spelling pubmed-106469442023-10-03 Force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects Plé, Thomas Lagardère, Louis Piquemal, Jean-Philip Chem Sci Chemistry We introduce FENNIX (Force-Field-Enhanced Neural Network InteraXions), a hybrid approach between machine-learning and force-fields. We leverage state-of-the-art equivariant neural networks to predict local energy contributions and multiple atom-in-molecule properties that are then used as geometry-dependent parameters for physically-motivated energy terms which account for long-range electrostatics and dispersion. Using high-accuracy ab initio data (small organic molecules/dimers), we trained a first version of the model. Exhibiting accurate gas-phase energy predictions, FENNIX is transferable to the condensed phase. It is able to produce stable Molecular Dynamics simulations, including nuclear quantum effects, for water predicting accurate liquid properties. The extrapolating power of the hybrid physically-driven machine learning FENNIX approach is exemplified by computing: (i) the solvated alanine dipeptide free energy landscape; (ii) the reactive dissociation of small molecules. The Royal Society of Chemistry 2023-10-03 /pmc/articles/PMC10646944/ /pubmed/38020379 http://dx.doi.org/10.1039/d3sc02581k Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Plé, Thomas
Lagardère, Louis
Piquemal, Jean-Philip
Force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects
title Force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects
title_full Force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects
title_fullStr Force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects
title_full_unstemmed Force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects
title_short Force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects
title_sort force-field-enhanced neural network interactions: from local equivariant embedding to atom-in-molecule properties and long-range effects
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10646944/
https://www.ncbi.nlm.nih.gov/pubmed/38020379
http://dx.doi.org/10.1039/d3sc02581k
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