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Identification of the Maize LEA Gene Family and Its Relationship with Kernel Dehydration
Maize, the most widely planted and highest yielding of the three major crops in the world, requires the development and breeding of new varieties to accommodate the shift towards mechanized harvesting. However, the moisture content of kernels during harvest poses a significant challenge to mechanize...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10647770/ https://www.ncbi.nlm.nih.gov/pubmed/37960031 http://dx.doi.org/10.3390/plants12213674 |
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author | Zhang, Yaping Zhang, Xiaojun Zhu, Liangjia Wang, Lexin Zhang, Hao Zhang, Xinghua Xu, Shutu Xue, Jiquan |
author_facet | Zhang, Yaping Zhang, Xiaojun Zhu, Liangjia Wang, Lexin Zhang, Hao Zhang, Xinghua Xu, Shutu Xue, Jiquan |
author_sort | Zhang, Yaping |
collection | PubMed |
description | Maize, the most widely planted and highest yielding of the three major crops in the world, requires the development and breeding of new varieties to accommodate the shift towards mechanized harvesting. However, the moisture content of kernels during harvest poses a significant challenge to mechanized harvesting, leading to seed breakage and increased storage costs. Previous studies highlighted the importance of LEA (Late Embryogenesis Abundant) members in regulating kernel dehydration. In this study, we aimed to gain a better understanding of the relationship between the LEA family and grain dehydration in maize. Through expression pattern analysis of maize, we identified 52 LEA genes (ZmLEAs) distributed across 10 chromosomes, organized into seven subgroups based on phylogenetic analysis, gene structure, and conserved motifs. Evolutionary and selective pressure analysis revealed that the amplification of ZmLEA genes primarily resulted from whole-genome or fragment replication events, with strong purifying selection effects during evolution. Furthermore, the transcriptome data of kernels of two maize inbred lines with varying dehydration rates at different developmental stages showed that 14 ZmLEA genes were expressed differentially in the two inbreds. This suggested that the ZmLEA genes might participate in regulating the kernel dehydration rate (KDR) in maize. Overall, this study enhances our understanding of the ZmLEA family and provides a foundation for further research into its role in regulating genes associated with grain dehydration in maize. |
format | Online Article Text |
id | pubmed-10647770 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-106477702023-10-25 Identification of the Maize LEA Gene Family and Its Relationship with Kernel Dehydration Zhang, Yaping Zhang, Xiaojun Zhu, Liangjia Wang, Lexin Zhang, Hao Zhang, Xinghua Xu, Shutu Xue, Jiquan Plants (Basel) Article Maize, the most widely planted and highest yielding of the three major crops in the world, requires the development and breeding of new varieties to accommodate the shift towards mechanized harvesting. However, the moisture content of kernels during harvest poses a significant challenge to mechanized harvesting, leading to seed breakage and increased storage costs. Previous studies highlighted the importance of LEA (Late Embryogenesis Abundant) members in regulating kernel dehydration. In this study, we aimed to gain a better understanding of the relationship between the LEA family and grain dehydration in maize. Through expression pattern analysis of maize, we identified 52 LEA genes (ZmLEAs) distributed across 10 chromosomes, organized into seven subgroups based on phylogenetic analysis, gene structure, and conserved motifs. Evolutionary and selective pressure analysis revealed that the amplification of ZmLEA genes primarily resulted from whole-genome or fragment replication events, with strong purifying selection effects during evolution. Furthermore, the transcriptome data of kernels of two maize inbred lines with varying dehydration rates at different developmental stages showed that 14 ZmLEA genes were expressed differentially in the two inbreds. This suggested that the ZmLEA genes might participate in regulating the kernel dehydration rate (KDR) in maize. Overall, this study enhances our understanding of the ZmLEA family and provides a foundation for further research into its role in regulating genes associated with grain dehydration in maize. MDPI 2023-10-25 /pmc/articles/PMC10647770/ /pubmed/37960031 http://dx.doi.org/10.3390/plants12213674 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Yaping Zhang, Xiaojun Zhu, Liangjia Wang, Lexin Zhang, Hao Zhang, Xinghua Xu, Shutu Xue, Jiquan Identification of the Maize LEA Gene Family and Its Relationship with Kernel Dehydration |
title | Identification of the Maize LEA Gene Family and Its Relationship with Kernel Dehydration |
title_full | Identification of the Maize LEA Gene Family and Its Relationship with Kernel Dehydration |
title_fullStr | Identification of the Maize LEA Gene Family and Its Relationship with Kernel Dehydration |
title_full_unstemmed | Identification of the Maize LEA Gene Family and Its Relationship with Kernel Dehydration |
title_short | Identification of the Maize LEA Gene Family and Its Relationship with Kernel Dehydration |
title_sort | identification of the maize lea gene family and its relationship with kernel dehydration |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10647770/ https://www.ncbi.nlm.nih.gov/pubmed/37960031 http://dx.doi.org/10.3390/plants12213674 |
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