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Identification of the High-Affinity Potassium Transporter Gene Family (HKT) in Brassica U-Triangle Species and Its Potential Roles in Abiotic Stress in Brassica napus L.

Members of the high-affinity potassium transporter (HKT) protein family regulate the uptake and homeostasis of sodium and potassium ions, but little research describes their roles in response to abiotic stresses in rapeseed (Brassica napus L.). In this study, we identified and characterized a total...

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Autores principales: Yang, Xiaoran, Hu, Ran, Sun, Fujun, Shen, Shulin, Zhang, Mengzhen, Liu, Yiwei, Zhang, Yi, Du, Hai, Lu, Kun, Qu, Cunmin, Yin, Nengwen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10649870/
https://www.ncbi.nlm.nih.gov/pubmed/37960124
http://dx.doi.org/10.3390/plants12213768
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author Yang, Xiaoran
Hu, Ran
Sun, Fujun
Shen, Shulin
Zhang, Mengzhen
Liu, Yiwei
Zhang, Yi
Du, Hai
Lu, Kun
Qu, Cunmin
Yin, Nengwen
author_facet Yang, Xiaoran
Hu, Ran
Sun, Fujun
Shen, Shulin
Zhang, Mengzhen
Liu, Yiwei
Zhang, Yi
Du, Hai
Lu, Kun
Qu, Cunmin
Yin, Nengwen
author_sort Yang, Xiaoran
collection PubMed
description Members of the high-affinity potassium transporter (HKT) protein family regulate the uptake and homeostasis of sodium and potassium ions, but little research describes their roles in response to abiotic stresses in rapeseed (Brassica napus L.). In this study, we identified and characterized a total of 36 HKT genes from the species comprising the triangle of U model (U-triangle species): B. rapa, B. nigra, B. oleracea, B. juncea, B. napus, and B. carinata. We analyzed the phylogenetic relationships, gene structures, motif compositions, and chromosomal distributions of the HKT family members of rapeseed. Based on their phylogenetic relationships and assemblage of functional domains, we classified the HKT members into four subgroups, HKT1;1 to HKT1;4. Analysis of the nonsynonymous substitutions (Ka), synonymous substitutions (Ks), and the Ka/Ks ratios of HKT gene pairs suggested that these genes have experienced strong purifying selective pressure after duplication, with their evolutionary relationships supporting the U-triangle theory. Furthermore, the expression profiles of BnaHKT genes varies among potassium, phytohormone and heavy-metal treatment. Their repression provides resistance to heavy-metal stress, possibly by limiting uptake. Our results systematically reveal the characteristics of HKT family proteins and their encoding genes in six Brassica species and lay a foundation for further exploration of the role of HKT family genes in heavy-metal tolerance.
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spelling pubmed-106498702023-11-04 Identification of the High-Affinity Potassium Transporter Gene Family (HKT) in Brassica U-Triangle Species and Its Potential Roles in Abiotic Stress in Brassica napus L. Yang, Xiaoran Hu, Ran Sun, Fujun Shen, Shulin Zhang, Mengzhen Liu, Yiwei Zhang, Yi Du, Hai Lu, Kun Qu, Cunmin Yin, Nengwen Plants (Basel) Article Members of the high-affinity potassium transporter (HKT) protein family regulate the uptake and homeostasis of sodium and potassium ions, but little research describes their roles in response to abiotic stresses in rapeseed (Brassica napus L.). In this study, we identified and characterized a total of 36 HKT genes from the species comprising the triangle of U model (U-triangle species): B. rapa, B. nigra, B. oleracea, B. juncea, B. napus, and B. carinata. We analyzed the phylogenetic relationships, gene structures, motif compositions, and chromosomal distributions of the HKT family members of rapeseed. Based on their phylogenetic relationships and assemblage of functional domains, we classified the HKT members into four subgroups, HKT1;1 to HKT1;4. Analysis of the nonsynonymous substitutions (Ka), synonymous substitutions (Ks), and the Ka/Ks ratios of HKT gene pairs suggested that these genes have experienced strong purifying selective pressure after duplication, with their evolutionary relationships supporting the U-triangle theory. Furthermore, the expression profiles of BnaHKT genes varies among potassium, phytohormone and heavy-metal treatment. Their repression provides resistance to heavy-metal stress, possibly by limiting uptake. Our results systematically reveal the characteristics of HKT family proteins and their encoding genes in six Brassica species and lay a foundation for further exploration of the role of HKT family genes in heavy-metal tolerance. MDPI 2023-11-04 /pmc/articles/PMC10649870/ /pubmed/37960124 http://dx.doi.org/10.3390/plants12213768 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yang, Xiaoran
Hu, Ran
Sun, Fujun
Shen, Shulin
Zhang, Mengzhen
Liu, Yiwei
Zhang, Yi
Du, Hai
Lu, Kun
Qu, Cunmin
Yin, Nengwen
Identification of the High-Affinity Potassium Transporter Gene Family (HKT) in Brassica U-Triangle Species and Its Potential Roles in Abiotic Stress in Brassica napus L.
title Identification of the High-Affinity Potassium Transporter Gene Family (HKT) in Brassica U-Triangle Species and Its Potential Roles in Abiotic Stress in Brassica napus L.
title_full Identification of the High-Affinity Potassium Transporter Gene Family (HKT) in Brassica U-Triangle Species and Its Potential Roles in Abiotic Stress in Brassica napus L.
title_fullStr Identification of the High-Affinity Potassium Transporter Gene Family (HKT) in Brassica U-Triangle Species and Its Potential Roles in Abiotic Stress in Brassica napus L.
title_full_unstemmed Identification of the High-Affinity Potassium Transporter Gene Family (HKT) in Brassica U-Triangle Species and Its Potential Roles in Abiotic Stress in Brassica napus L.
title_short Identification of the High-Affinity Potassium Transporter Gene Family (HKT) in Brassica U-Triangle Species and Its Potential Roles in Abiotic Stress in Brassica napus L.
title_sort identification of the high-affinity potassium transporter gene family (hkt) in brassica u-triangle species and its potential roles in abiotic stress in brassica napus l.
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10649870/
https://www.ncbi.nlm.nih.gov/pubmed/37960124
http://dx.doi.org/10.3390/plants12213768
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