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Mitogenomic Phylogeny of Tonnoidea Suter, 1913 (1825) (Gastropoda: Caenogastropoda)

SIMPLE SUMMARY: We sequenced the complete mitochondrial genomes of nine Tonnoidean species, and analyzed the genomic features including genome size, gene order, nucleotide composition and Ka/Ks ratio. The reconstructed phylogeny based on mitogenomic data supported the Tonnoidea classifications at fa...

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Autores principales: Zheng, Jiawen, Li, Fengping, Fan, Mingfu, Gu, Zhifeng, Liu, Chunsheng, Wang, Aimin, Yang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10649890/
https://www.ncbi.nlm.nih.gov/pubmed/37958096
http://dx.doi.org/10.3390/ani13213342
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author Zheng, Jiawen
Li, Fengping
Fan, Mingfu
Gu, Zhifeng
Liu, Chunsheng
Wang, Aimin
Yang, Yi
author_facet Zheng, Jiawen
Li, Fengping
Fan, Mingfu
Gu, Zhifeng
Liu, Chunsheng
Wang, Aimin
Yang, Yi
author_sort Zheng, Jiawen
collection PubMed
description SIMPLE SUMMARY: We sequenced the complete mitochondrial genomes of nine Tonnoidean species, and analyzed the genomic features including genome size, gene order, nucleotide composition and Ka/Ks ratio. The reconstructed phylogeny based on mitogenomic data supported the Tonnoidea classifications at family levels, but their internal relationships remained unclear. At the species level, the present study indicates that species diversity within Bursidae might be underestimated. ABSTRACT: The Tonnoidea Suter, 1913 (1825) is a moderately diverse group of large predatory gastropods, the systematics of which remain unclear. In the present study, the complete mitochondrial genomes of nine Tonnoidean species were sequenced. All newly sequenced mitogenomes contain 13 protein-coding genes (PCGs), 22 transfer RNA genes and two ribosomal RNA genes, showing similar patterns in genome size, gene order and nucleotide composition. The ratio of nonsynonymous to synonymous of PCGs indicated that NADH complex genes of Tonnoideans were experiencing a more relaxed purifying selection compared with the COX genes. The reconstructed phylogeny based on the combined amino acid sequences of 13 protein-coding genes and the nucleotide sequences of two rRNA genes supported that Ficidae Meek, 1864 (1840) is a sister to Tonnoidea. The monophylies of all Tonnoidean families were recovered and the internal phylogenetic relationships were consistent with the current classification. The phylogeny also revealed that Tutufa rebuta (Linnaeus, 1758) is composed of at least two different species, indicating that the species diversity within Bursidae Thiele, 1925 might be underestimated. The present study contributes to the understanding of the Tonnoidean systematics, and it could provide important information for the revision of Tonnoidean systematics in the future.
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spelling pubmed-106498902023-10-27 Mitogenomic Phylogeny of Tonnoidea Suter, 1913 (1825) (Gastropoda: Caenogastropoda) Zheng, Jiawen Li, Fengping Fan, Mingfu Gu, Zhifeng Liu, Chunsheng Wang, Aimin Yang, Yi Animals (Basel) Article SIMPLE SUMMARY: We sequenced the complete mitochondrial genomes of nine Tonnoidean species, and analyzed the genomic features including genome size, gene order, nucleotide composition and Ka/Ks ratio. The reconstructed phylogeny based on mitogenomic data supported the Tonnoidea classifications at family levels, but their internal relationships remained unclear. At the species level, the present study indicates that species diversity within Bursidae might be underestimated. ABSTRACT: The Tonnoidea Suter, 1913 (1825) is a moderately diverse group of large predatory gastropods, the systematics of which remain unclear. In the present study, the complete mitochondrial genomes of nine Tonnoidean species were sequenced. All newly sequenced mitogenomes contain 13 protein-coding genes (PCGs), 22 transfer RNA genes and two ribosomal RNA genes, showing similar patterns in genome size, gene order and nucleotide composition. The ratio of nonsynonymous to synonymous of PCGs indicated that NADH complex genes of Tonnoideans were experiencing a more relaxed purifying selection compared with the COX genes. The reconstructed phylogeny based on the combined amino acid sequences of 13 protein-coding genes and the nucleotide sequences of two rRNA genes supported that Ficidae Meek, 1864 (1840) is a sister to Tonnoidea. The monophylies of all Tonnoidean families were recovered and the internal phylogenetic relationships were consistent with the current classification. The phylogeny also revealed that Tutufa rebuta (Linnaeus, 1758) is composed of at least two different species, indicating that the species diversity within Bursidae Thiele, 1925 might be underestimated. The present study contributes to the understanding of the Tonnoidean systematics, and it could provide important information for the revision of Tonnoidean systematics in the future. MDPI 2023-10-27 /pmc/articles/PMC10649890/ /pubmed/37958096 http://dx.doi.org/10.3390/ani13213342 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zheng, Jiawen
Li, Fengping
Fan, Mingfu
Gu, Zhifeng
Liu, Chunsheng
Wang, Aimin
Yang, Yi
Mitogenomic Phylogeny of Tonnoidea Suter, 1913 (1825) (Gastropoda: Caenogastropoda)
title Mitogenomic Phylogeny of Tonnoidea Suter, 1913 (1825) (Gastropoda: Caenogastropoda)
title_full Mitogenomic Phylogeny of Tonnoidea Suter, 1913 (1825) (Gastropoda: Caenogastropoda)
title_fullStr Mitogenomic Phylogeny of Tonnoidea Suter, 1913 (1825) (Gastropoda: Caenogastropoda)
title_full_unstemmed Mitogenomic Phylogeny of Tonnoidea Suter, 1913 (1825) (Gastropoda: Caenogastropoda)
title_short Mitogenomic Phylogeny of Tonnoidea Suter, 1913 (1825) (Gastropoda: Caenogastropoda)
title_sort mitogenomic phylogeny of tonnoidea suter, 1913 (1825) (gastropoda: caenogastropoda)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10649890/
https://www.ncbi.nlm.nih.gov/pubmed/37958096
http://dx.doi.org/10.3390/ani13213342
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